Paraburkholderia xenovorans LB400: DR64_1798
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Entry
DR64_1798 CDS
T03290
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb02020
Two-component system
bxb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DR64_1798 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DR64_1798 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxb03021
]
DR64_1798 (rpoN)
Transcription machinery [BR:
bxb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DR64_1798 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIP32472
UniProt:
Q145W1
LinkDB
All DBs
Position
1:1972008..1973525
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AA seq
505 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAISQNPLLENEDDWIASPLRV
AADGSLIAQAPNSSAPPDQMGGSTSSSSTSSSERAENGEPQGVDEYNGLAGDSNGDASQW
NLDDYGRSGNASDDDDLPPLQIHESSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDD
GYLAATLEEVLADLPEELEVDLDELNAALALLHSFDPAGVGARSASECLKLQLLRLDASP
TRTLALEIVAHHLELLAARDFTRLRKHLKASDDDLRDAHVLIRSLEPFPGAAYGKAEADY
VVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK
NIQQRFETILRVAQAIVERQKSFFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML
TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENPKSPLSDSRIAELLAEQGF
VVARRTVAKYREALKIPAVNLRKSL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcctccaactccgcctatcgcagcatcttgcgctgacgccgcaactgcag
cagtccatccggctgcttcagttgtccacgctcgaattgcagcaggaagtcgcaatggcg
atctcgcagaatccgctcctcgagaacgaggacgactggatcgcgagcccgctgcgcgtg
gcggccgacggctcgctgatcgcccaggcgccgaattcctccgctccgcccgaccagatg
ggcggcagcacgtcgtcatcgtccaccagcagcagcgagcgcgccgagaacggcgagccg
cagggcgtggacgaatacaacggcctcgcgggcgacagtaacggcgacgcgtcgcaatgg
aatctcgacgactacggccgctcgggcaacgcctcggacgacgacgacctgccgccgctg
caaatccacgaatcgagcacctcgctgcgcgatcacctgatggcgcaattgcgcgtcacc
caggcgagtccgcgcgaccgcgcgctggtcacgttcctgatcgagtcgctcgacgacgac
ggctaccttgccgccacgctcgaagaagtgctggcggatctgcccgaagagctcgaagtc
gacctcgacgagctgaatgccgcgcttgcgctgctgcatagcttcgacccggccggggtc
ggcgcgcgctccgcgtcggaatgtctcaagctgcaattgctgcgactcgatgcctcacct
acccgcacgcttgcgctcgaaatcgtagcgcaccacctggaattgctcgcggcgcgcgac
ttcacgcgcctgcgcaaacatctgaaagccagcgacgacgacctgcgcgatgcacacgtg
ctgatccgctcgctcgaaccgttccccggcgccgcctacggcaaggccgaagcggactat
gtcgtgccggacatcatggtgcgtaaaacagcacagggctggcaggccgagctgaacccg
gaagtcgtgcccaagctgcgtatcaaccatctttacgcgaatatcctgcgcaataaccgg
ggcgatccgggcagcggttcgttgcgccagcaactgcaggaagcgcgctggctgatcaaa
aatatccagcagcgtttcgagacgatcctccgggtggcgcaagccattgtggagcgtcaa
aagagcttttttgtgcatggcgaaattgccatgcgccccttggttttgcgggaaattgct
gatacgctgggcctacacgagtcaactgtctcgcgtgtgacaaccggcaaatacatgctg
accccattcgggacgcttgaatttaagtacttcttcggatcacacgtttcgactgacacg
ggcggcgcggcgtcttcaacggcgatccgtgcgctcatcaagcaactgataggagcggaa
aacccgaaatctcctctttcagacagccgcatagccgaactgctggcggaacagggcttc
gtggtcgcacggcgtaccgtcgcgaaatatcgtgaagcgctcaagattccggcagtcaac
ctgcgcaagtcgttatag
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