Paraburkholderia xenovorans LB400: DR64_2050
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Entry
DR64_2050 CDS
T03290
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00300
Lysine biosynthesis
bxb00470
D-Amino acid metabolism
bxb01100
Metabolic pathways
bxb01110
Biosynthesis of secondary metabolites
bxb01120
Microbial metabolism in diverse environments
bxb01230
Biosynthesis of amino acids
Module
bxb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DR64_2050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DR64_2050 (dapF)
Enzymes [BR:
bxb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DR64_2050 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
MreB_Mbl
TAL_effector
CitF
Motif
Other DBs
NCBI-ProteinID:
AIP32865
UniProt:
Q146W2
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All DBs
Position
1:2239935..2240798
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRERGLTDQRSVRVQVQKGTITLTMQENGEVLVDM
GTPVFDPERVPFATKGLEGRREGADTLWPLDVSGTTRWISVVSMGNPHAVQVVGDVEAFP
VLAEGPVIERHARFPQRVNAGFMQIVGRNEIRLRVYERGAGETLACGTGACAAVAAGIRR
GLLDSPVRVHTHGGDLTISWDSTREGEPLLMAGPAVTVFEGEIELPD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttc
ggcgtcggcgccgaccagttgctgctggtcgaaaagcccacggtggccggtgtcgatttc
agatatcgcatcttcaattgcgacggcggcgaagtggagcattgcggcaacggcgcgcgc
tgcttcgtcaagttcgtgcgcgagcgcggcctcaccgatcaacgcagcgtgcgcgtgcag
gtgcagaagggcaccatcacgctgaccatgcaggaaaacggcgaagtgctggtcgacatg
ggcacgcccgtgttcgacccggagcgcgtgccgttcgccaccaaaggcctcgaaggccgc
cgcgagggagcggacacgctctggccgctcgacgtgagcggcacgacacggtggatttcg
gtggtctcgatgggcaatccgcacgccgtgcaggtcgtcggcgacgtcgaagcgttcccg
gtgctggccgaaggcccggtgatcgagcgtcatgcgcgttttccgcagcgggtgaacgcg
ggcttcatgcagatagtcggccgcaatgaaatcaggctgcgcgtgtacgagcgcggcgcg
ggtgaaacgctggcgtgcggcacgggcgcatgcgcggcggtcgcggccggcatccggcgc
gggctgctcgactcacccgtgcgcgtgcacacgcacggcggcgacctgaccatctcgtgg
gacagcacgcgagaaggcgaaccgctactcatggccggaccggccgtgaccgttttcgaa
ggcgagatcgagctgcccgactga
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