Paraburkholderia xenovorans LB400: DR64_2478
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Entry
DR64_2478 CDS
T03290
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR64_2478 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bxb03019
]
DR64_2478 (recQ)
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_2478 (recQ)
Enzymes [BR:
bxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DR64_2478 (recQ)
Messenger RNA biogenesis [BR:
bxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR64_2478 (recQ)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DR64_2478 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIP32484
UniProt:
Q13TG4
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All DBs
Position
1:2721909..2723756
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AA seq
615 aa
AA seq
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MSRPLEILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRRERGF
GTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALREGDIDLLYVAPER
LMTPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIIHRLALDDARIFVSSFDRPNIRYRIVEKDNARTQLLDFIRAEHSKPDGTTDAG
VVYCLSRRKVEETAEWLKEKGMRALPYHAGMDFEIRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCEAATCRRVRLLAYFGESSKPCGNCDNCLEPPDTWDATREAQMA
LSCVFRAQRASGFHFGAGHLIDILRGNSNEKILQRGHEKLTTFGIGSALGEPEWRAIFRQ
LVAFGYLTVDHEGFGSLVLTETSKPVLKGEQNVTMRRYVKPTRTRQSSGRTSERADPTIG
MGPRERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIEDLRGIPGMGARK
LDRFGDELLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgaaatcctcaacgaagtcttcggttaccccgcgttcagaggacag
cagggcgaaattgtcgagcacgtcgccggcggcggcgattgtctcgtgctgatgccgacg
ggcggcggcaaatccttgtgttatcagattccgtcgctggtgcgccgcgagcgcggcttc
ggcacaggcatcgtcgtgtctccgctgatcgcgctgatgcaggatcaggtggccgcgctt
acagaggtgggcgtgcgcgcggcgtacctgaattcgacgctgtcgagcgccgaggcgatg
gcgaccgagcgtgcattgcgcgaaggcgatatcgatctcctctacgtggcgccggaacgg
ttgatgacgccccgtttccaggaattgctggaacgtacccgcatcggcttgttcgccatc
gacgaggctcattgtgtgtcgcaatggggacatgatttccggccggaatacatccagttg
tcggtgctgcacgagcggtttccgaacgtgcctcgaatcgcgctgacggccaccgccgat
gcaatcacgcgggacgagatcatccaccggctcgcgctggacgacgcgcgcattttcgtg
tcgagcttcgaccggccgaacatccgctatcgcatcgttgaaaaggacaacgcgcgtacg
cagttgctggactttatccgcgcggaacattcgaagccggacggcacgaccgacgccggc
gttgtctattgcctgtcgcgccgcaaggtcgaagagaccgcggagtggctgaaagaaaaa
gggatgcgtgcgctgccgtatcacgccggcatggacttcgagatccgtcagaagcatcag
gagatgtttcagcgcgaggaaggcatcgtgatgtgcgcgacgattgcatttggcatgggc
atcgacaagccggacgtgcgttttgtcgctcacctcgacttgccgaagagcgtcgaaggc
tattaccaggaaacggggcgcgcgggccgcgacggcatgccggcgaatgcgtggatggcc
tacggcctcggcgacgtcgtgcagcaacgcaagatgatcgacgagtccgacgccgacgac
gcgcacaagcgcgtgcagaccggcaagctggacgcgctgctcggtctgtgcgaagcggca
acctgccggcgggtgcggttgctggcgtatttcggcgaatcgagcaagccatgtggcaac
tgcgacaactgtcttgaaccgccggacacgtgggatgctacgcgtgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgggcgagcggttttcatttcggcgcgggacatctg
atcgacatcctgcgcggcaacagcaacgagaaaatcctgcagcgtggtcatgagaaactg
accacgttcggtatcggttcggcgctaggcgaacccgagtggcgcgcgatatttcgccaa
ctcgtcgcgttcggctatctgacggtcgatcatgaggggttcggctcgctggtcctgacc
gagacgagcaaacccgtgctaaagggcgagcagaacgtcacgatgcgccggtacgtgaag
ccgacgcgtacacgtcaatcgtccggccgcaccagtgaacgcgccgacccgacaatcggc
atgggaccacgtgaacgcgcccgctgggaacgcctgcgtgcgtggcgcaccgaaacggcg
aagagcgacggcgtgccggcgtatgtgatcttccacgacgcgacgctggcggaaatcgcc
cgtaacggtcccgattccatcgaagatttgcgtggcattccgggcatgggcgcacgcaag
ctcgaccgcttcggcgacgaattgctggaagtcgtcgccgccgactaa
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