Paraburkholderia xenovorans LB400: DR64_2935
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Entry
DR64_2935 CDS
T03290
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DR64_2935 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_2935 (xseA)
Enzymes [BR:
bxb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DR64_2935 (xseA)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DR64_2935 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIP33542
UniProt:
Q13US3
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All DBs
Position
1:3207685..3209064
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AA seq
459 aa
AA seq
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MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFTRAASGHWYFSI
KDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRLY
EAFLRLKAQLEAEGLFAAERKRPLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVIV
YPAPVQGAGVSGKLAAMVDAANARREVDVLIVCRGGGSIEDLWAFNEEVLARAIAESAIP
VVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARGFGRMMER
RAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASGGTRPVRDARARFSLLQMRWQRWRP
DLAGHRAKLGNLAGRLDTALLRQHERQTARIDTLAARLEVLSPQRTLERGYAAVLDAQSG
RAVRAPSSLKPGRRLTVHLAEGAADIALADVQPRLTDGF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaaagcccatttttctcgtcggccgcgcccggcggcgaagtcgtcgttccc
gtttcggcgctcaatcgcgcaatcggcacgatgctcgaacgctcgtttccgctcgtctgg
gttgccggcgaagtatcgaacttcacgcgcgccgcgagcggccactggtatttctcgatc
aaggacgcgcaggcgcagatgcgctgcgtgatgttccgcgggcgggcgcaatacgccgaa
ttcacgccgcgcgaaggcgatcgcattgaagtgcgcgcactggtgacgatgtacgagccg
cgtggcgagctgcaactgaatgtggaagcggtgcggcgcaccggtcaggggcgtctctat
gaagcgttcctgcggctgaaagcgcagctcgaagccgagggtctctttgccgccgaacga
aaacggccgctgccgtcgcatccgcgagcgatcggcattgtgacgtcgttgcaggccgcg
gcattgcgcgatgtcctgaccacgctgtcgcgccgcgcgccgcacattccggtgatcgtc
tatccggcgccggtgcagggcgcgggcgtgagcgggaagctcgccgcgatggtcgatgcc
gccaacgcaaggcgcgaagtcgacgtgctgatcgtctgccgcggcggcggctcgatcgaa
gacctgtgggcgttcaacgaagaagtgctggcgcgcgcgattgcggaaagcgccattccg
gtggtgagcggcgtgggtcacgaaaccgatttcacgatcgccgattttgccgccgacgtg
cgcgcgccgacgccgaccggcgcggccgaactggtgagtccgcagcgcgtgctgctgttg
cgcgagctcgaccaccgccacgcgacactcgcacgcggtttcggccgcatgatggagcgg
cgtgcgcagcaactcgactggctcgcgcgcaggctggtgtcgccagccgagcgtctcgcg
cggcaacgcactcatttgcagcaactgagtgtgcggctcgcgtcggggggcacgcgcccg
gtgcgtgatgcaagagcgcggttttcgctgctacagatgcgctggcaacgctggcgccct
gatctcgccgggcaccgggcgaagctcggcaatctcgcagggcgtctggacacggctttg
ttacggcagcatgaacgtcagaccgcgcgcatcgacacgcttgccgcgcgtctcgaagtg
ctgagcccgcagcgcacgctggagcgtggctatgcggcggtgctcgatgcgcagagcggg
cgcgcggtgcgtgcaccgtcgtcgttgaagccggggcggcgcctcacggtgcatctcgcg
gaaggtgccgcggacatcgcgctcgcggatgtgcagccgcgtctgaccgacggattctga
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