Paraburkholderia xenovorans LB400: DR64_3144
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Entry
DR64_3144 CDS
T03290
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxb03032
]
DR64_3144 (ihfB)
03036 Chromosome and associated proteins [BR:
bxb03036
]
DR64_3144 (ihfB)
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_3144 (ihfB)
DNA replication proteins [BR:
bxb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DR64_3144 (ihfB)
Chromosome and associated proteins [BR:
bxb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DR64_3144 (ihfB)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DR64_3144 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AIP31612
UniProt:
Q13VC5
LinkDB
All DBs
Position
1:3442966..3443289
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLATRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKYVPHFKPGKELRERVDRRAGEPLKAEDPDDDL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattggtcgcccagctggctacgcgatttccgcaacttgttcttaaa
gatgcggatttcgcggtgaagacgatgcttgatgcgatgtcggaggcgcttgccaacggt
catcgcattgaaattcgcggcttcggcagcttcggccttaaccgccgtccctcccgcgtc
gggcgtaatccgaagtcgggcgagaaggtgttggtacctgagaagtacgtaccgcacttc
aagccaggcaaggaattgcgtgagcgggtagatcgtcgcgcgggcgagccgctgaaggcc
gaagatccggatgacgacctgtaa
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