Paraburkholderia xenovorans LB400: DR64_3498
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Entry
DR64_3498 CDS
T03290
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03420
Nucleotide excision repair
bxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DR64_3498
03430 Mismatch repair
DR64_3498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_3498
Enzymes [BR:
bxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DR64_3498
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DR64_3498
MMR (mismatch excision repair)
Other MMR factors
DR64_3498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIP33813
UniProt:
Q13WC3
LinkDB
All DBs
Position
1:3796664..3799015
Genome browser
AA seq
783 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGEANSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARQYNCSMAAAIPYVAGKAGSSLAGFANLIGKMRAETQQMSLPETVEYVVRASG
LSEFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTIVFDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKIEPGARWGGRSDNAGYGRDWFARPGYTGAASSTPAPLPA
FANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGTDAKAQVKFKRHGEKWLALAVAKLQ
AVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctagccaatctcaaccccgaacaacacgccgccgtcacgctccccaac
gagccggcgctcattctcgccggcgcgggcagcggcaagacccgcgttctgatcacgcgt
attgcctggctgatccagcatgggctggcctcgcccgccacgattctggcggtgactttc
accaacaaggccgcccgcgaaatgatgtcgcgcctctcggcgctcctgccgatcgacacg
cgcggcatgtggatcggcaccttccacggtctgtgcaaccgcatgctgcgcgcgcatcac
cgcgacgcgggcctgccggccaccttccagattctcgacaccgcggaccagctttccgcg
atcaagcgtctgatgaagggcctcaatatcgacgacgaaaagtacccggcgaaaaatctc
cagtacttcatcaacaacgcgaaagaacaaggcctgcggccgaaagacgtcgacgccacg
gacaacttcaaccgcaaattcgtcgaactctacgaagcctacgaccagcaatgccagcgc
gaaggcgtggtcgactttccggaactgctgctgcgctgctacgagctgctcgcgcacaat
ccgccgctgcgcgcgcactaccaggcgcgcttcaggcacattctggtcgacgagttccag
gacaccaacaagctgcaatatgcgtggctcaagctgctggcgggcgaggccaactcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgtttcgcggcgcgaacgtcggcaac
atgcgcgacttcgaacacgagttcaacgttcgccacctgatcaagctcgaacagaactac
cgctcgcacggccatattctcgacgccgccaatcagctgatcgccaacaactcgcggcgt
ctgggcaagaatctgcgtaccgacgcgggtcacggcgaaccggtgcgcgtgtatgaatcc
gccaccgactcgcaggaagccggctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgaaatcgcgattctttatcgcagcaacgcgcagtcgcgcacgatc
gaacacacgctggtcaatgcgggtatcgcgtaccgcgtgtacggcggcttgcgctttttc
gagcgtcaggaagtcaagcacgcgctcgcctatctgcgcctgatcgacaatccgaacgac
gacaccgcgttcgcgcgcgtcgtcaatttcccgacgcgcggcatcggcgctcgctcgatc
gagcaactcgcggacgcggcgcgtcagtacaactgctcgatggccgcggcgattccgtac
gtggcgggcaaggcggggtcgagcctcgcgggcttcgcgaacctgatcggcaagatgcgc
gccgaaacgcagcagatgagcctgccggaaaccgtcgaatacgtggtgcgcgcaagtggt
ctgtcggagttctatcagaacgaacgcgaaggccaggaccgcctggagaacttgcaggaa
ctggtcaacgcggccgcggcgttcgtcagcgaagagggctacggcatggacacgccggcg
cgctccattccgctgcgtccgggtgcgaccgccgcgcccgaactggcggtcgccaccgac
gatccgaataccatcgtgttcgacgcgcccggcatcgccgatccggcgcaaaacccggac
acgatgacaccgctcgccggcttcctgtcgcacgcgtcgctggaggcgggcgacaaccag
gcgcaagcgggccaggaagccgtgcaactgatgacggtgcacgcggccaagggccttgag
ttcacggcggtgttcatcaccggtctcgaagaagggctgttcccgcacgagaacagcgcg
atggaatcggacggtctggaagaagagcgccgcctgatgtacgtggcgatcacgcgggcc
aaggagcggctgtatctgtcgttcgcccagagccgcatgctgcacggccagacgcgttac
aacatccgctcgcgtttcttcgacgaactgccgcaggaaacgctcaagtggctcacgccg
aagatcgagccgggcgcgcgctggggtggccgttcggacaacgcgggttatgggcgcgac
tggttcgcgcggccgggttacacgggcgccgcgtcgtcgacgcccgcgccgctgccagcg
ttcgcgaacgaacagcgtgcagcggaaacgggtttccgcgtgggccagcaggtgttccac
accaaattcggcgaaggcacgatcaccgcgctcgaaggcggcggcaccgacgcaaaggcg
caggtcaaattcaagcggcacggcgagaagtggctggcgctcgcggtcgccaaactgcag
gcggtggaatga
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integrated database retrieval system
