KEGG   Paraburkholderia xenovorans LB400: DR64_3704
Entry
DR64_3704         CDS       T03290                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bxb  Paraburkholderia xenovorans LB400
Pathway
bxb00010  Glycolysis / Gluconeogenesis
bxb00020  Citrate cycle (TCA cycle)
bxb00260  Glycine, serine and threonine metabolism
bxb00280  Valine, leucine and isoleucine degradation
bxb00310  Lysine degradation
bxb00380  Tryptophan metabolism
bxb00620  Pyruvate metabolism
bxb00630  Glyoxylate and dicarboxylate metabolism
bxb00640  Propanoate metabolism
bxb00670  One carbon pool by folate
bxb00785  Lipoic acid metabolism
bxb01100  Metabolic pathways
bxb01110  Biosynthesis of secondary metabolites
bxb01120  Microbial metabolism in diverse environments
bxb01200  Carbon metabolism
bxb01210  2-Oxocarboxylic acid metabolism
bxb01240  Biosynthesis of cofactors
Module
bxb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bxb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bxb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bxb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bxb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DR64_3704 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DR64_3704 (lpdA)
   00620 Pyruvate metabolism
    DR64_3704 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DR64_3704 (lpdA)
   00640 Propanoate metabolism
    DR64_3704 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DR64_3704 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DR64_3704 (lpdA)
   00310 Lysine degradation
    DR64_3704 (lpdA)
   00380 Tryptophan metabolism
    DR64_3704 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DR64_3704 (lpdA)
   00670 One carbon pool by folate
    DR64_3704 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bxb04147]
    DR64_3704 (lpdA)
Enzymes [BR:bxb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DR64_3704 (lpdA)
Exosome [BR:bxb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DR64_3704 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Biotin_lipoyl_2 GIDA NAD_binding_8 AlaDh_PNT_C Pyr_redox_3 FAD_binding_2 FAD_binding_3 Thi4 GCV_H Peptidase_M23 DAO 3HCDH_N
Other DBs
NCBI-ProteinID: AIP31313
UniProt: Q13WX7
LinkDB
Position
1:4032992..4034803
AA seq 603 aa
MSLVEVKVPDIGDFKDVDVIEVNIKPGDVIENEQALMTLESDKASIEVPSDTAGTVREVR
VKAGDKVSQGTVIALVETSGEAAPAKDAPKAPAKEAEKAPAQAEAKPQAAEAPAAAPAKA
AAPAPQAGSYSGSADIECDMLVLGSGPGGYSAAFRSADLGMKTVLVERYSTLGGVCLNVG
CIPSKALLHTALVIDEAEALGAHGITFAKPQIDLDKLRDFKSGVVRKLTGGLAGMAKMRK
VEVVTGNGAFVDPYHMEVQTEGGKKVVKFKQAIIAAGSEAVKLPFIPEDPRVVDSTGALE
LRQIPQRMLVIGGGIIGLEMATVYATLGAKIDVVEMLDGLMAGADRDLVKVWEKYNSKRF
ANVMLKTKTTAAEAKDDGIHVSFEGEKAPAEAQRYDLVLVAVGRTPNGKKIGADKAGVAV
TDRGFIDVDKQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQIPS
VAYTDPEVAWAGKTEDQLKAAGIKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETHRVI
GGGIVGLNAGDLISEVCLAVEMGADATDIGKTIHPHPTLGESIGMAAELYEGVCTDLPPQ
KKK
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgagtctcgtcgaagtaaaagtgccggatatcggcgacttcaaagatgtcgatgtcatt
gaagtcaacatcaaaccgggcgatgtcatcgagaacgaacaggcgctgatgacgctcgaa
tccgataaggcttccatcgaagtgccgagcgacaccgccggcaccgtcagggaagtgcgc
gtcaaagccggcgataaggtttcgcaaggcacagtgatcgcgctcgtcgaaacatcgggg
gaggcggcgcccgcgaaagatgcaccgaaggcgccggccaaggaagctgagaaagcgccc
gctcaggcagaagccaagccgcaggcagccgaggctccggctgccgctccggccaaggcg
gcggcgcccgcgccgcaagccggcagctattcgggcagcgcggatatcgagtgcgacatg
ctcgtgctcggatccggccccggcggctactcggcagcgttccgctcggccgacctcggc
atgaagacggtgctggtcgagcgttattcgacgctcggcggcgtgtgtctgaatgtcggc
tgtattccgtcgaaagcgctgttgcatacggctctcgtgatcgacgaagccgaagcgctc
ggcgcacacggcattacgttcgccaagccgcaaatcgatctcgacaagctgcgtgatttc
aagtcgggcgtcgtcaggaagctgaccggcggtctcgccggcatggcgaagatgcgcaag
gtcgaagtggtgacgggtaacggcgcgtttgtcgatccgtatcacatggaagtgcagacc
gaaggcggcaagaaagtcgtcaagttcaagcaggcgatcatcgccgccggctcggaagcg
gtgaagctgccgttcattccggaagatccgcgcgtggtcgattcgaccggtgcgctcgaa
ctgcggcagattccgcaacgcatgctggtgatcggcggcggcatcatcggtctggaaatg
gccacggtgtatgccacgctcggcgcgaagatcgacgtggtcgaaatgctcgacggcctg
atggccggcgcggaccgcgatctggtcaaggtctgggagaagtacaacagcaagcgtttc
gcaaacgtcatgctgaagaccaaaaccaccgcagccgaagcgaaagacgacggcatccat
gtctcgttcgaaggcgaaaaagccccggccgaagcgcaacgctacgacctcgtgctggtg
gcagtcggccgtacgccgaatggcaagaaaatcggcgcggacaaggccggcgtcgcggtg
acggatcgcggctttatcgacgtcgacaagcagatgcgtaccaacgtgccgcacatcttc
gcgatcggcgatatcgtcggtcagccgatgctcgcgcataaagcggtgcacgaaggccac
gttgccgccgaagccgcgcatggtgagaaggcgtacttcgacgcgctgcagattccgtcg
gtggcttacaccgatccggaagtggcgtgggccggcaagaccgaagaccagttgaaggcg
gcgggcatcaagtacggcaaggcggtgttcccgtgggccgcttcgggccgcgcgattgcc
aacggtcgcgacgaaggcttcacgaagctgttgttcgacgaggaaacgcatcgcgtgatc
ggcggcgggatcgtcggcctgaatgcgggcgacctgatcagcgaagtgtgtctcgcagtc
gagatgggtgcggacgcaacggatatcggtaagacgattcatccgcatccgacgctcggt
gaatcgatcggcatggccgccgagttgtatgaaggcgtgtgcaccgacttgccgccgcag
aaaaagaagtag

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