KEGG   Paraburkholderia xenovorans LB400: DR64_3759
Entry
DR64_3759         CDS       T03290                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bxb  Paraburkholderia xenovorans LB400
Pathway
bxb02024  Quorum sensing
bxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DR64_3759 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DR64_3759 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bxb03019]
    DR64_3759 (hfq)
   03036 Chromosome and associated proteins [BR:bxb03036]
    DR64_3759 (hfq)
Messenger RNA biogenesis [BR:bxb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DR64_3759 (hfq)
Chromosome and associated proteins [BR:bxb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DR64_3759 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AIP33849
UniProt: Q13X33
LinkDB
Position
1:4093233..4093469
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDSEQS
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaagagcat
gtgccggtgtcgatctacctggtcaacggcatcaagcttcaagggaacatcgaatcgttc
gaccagtacgtcgtgttgctccggaatacggtcacccagatggtctacaagcacgcaatc
tcgactgtcgtgccagcccgcccggtgaatttccacccggattccgaacagtcctaa

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