Paraburkholderia xenovorans LB400: DR64_4080
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Entry
DR64_4080 CDS
T03290
Name
(GenBank) ligT like Phosphoesterase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bxb03016
]
DR64_4080
Enzymes [BR:
bxb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DR64_4080
Transfer RNA biogenesis [BR:
bxb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DR64_4080
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Acb1
Motif
Other DBs
NCBI-ProteinID:
AIP29694
UniProt:
Q13XZ2
LinkDB
All DBs
Position
1:4429014..4429619
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AA seq
201 aa
AA seq
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MPEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVT
LQHLGNFVGGLPQARVDAAMKAAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVG
LHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPWAAARPIEPVCWNVREFALVH
SLLGRTRHVLLARWPLADHGS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacaattctggttgcctgggctcgaggcgccgccaacgccgacagacggcctg
ttttttgccgtctttccagacgccaatacagcggccggcatctcgaagctggcgcaacgg
ctttgcgcggagacgcgcgcgcgcagcaagccgctcgcggcggcccgcttgcacgtcacc
ttgcagcacctcggcaatttcgtgggaggtttgccgcaagcgcgagtcgacgcggcgatg
aaagctgctgcgtcaatcaggatggagccgttcagcgtcgaattcgacacggtggtgagc
tttgcctcgaagcctcgaccgggaccattggtgctgacaggcggcgagggtgtggttggg
ttgcataggctgcacgacgctttgtgccgcgaactgcaaaacgcggatttcggcgagcac
gccgcgccggccgcggtggactatacgccgcacgtcacgctggcgtatggcatgccgtgg
gccgccgcacgccctatcgagccggtgtgctggaatgtgcgcgagttcgcgctggtgcac
agtctgctcgggcgcacgcgccatgtcctgctggcgcggtggcctttggccgatcacggg
tcatag
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