Paraburkholderia xenovorans LB400: DR64_4443
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Entry
DR64_4443 CDS
T03290
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxb03032
]
DR64_4443 (hupB)
03036 Chromosome and associated proteins [BR:
bxb03036
]
DR64_4443 (hupB)
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_4443 (hupB)
DNA replication proteins [BR:
bxb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DR64_4443 (hupB)
Chromosome and associated proteins [BR:
bxb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DR64_4443 (hupB)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DR64_4443 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HYPK_UBA
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIP31983
UniProt:
Q13Z12
LinkDB
All DBs
Position
1:complement(4861050..4861322)
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AA seq
90 aa
AA seq
DB search
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGTLKKGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacggaattgatcgatcacattgcacagcaagccgacatttcgaaggcagcg
gcaggccgtgcactcgacgctgtgatcggtggtgtcaaaggcacgttgaagaagggcggt
tccgtgacgttggtcggtttcggcacgttcgcggtgggcaagcgtaccgcgcgcacgggg
cgcaatccgcgcactggcgccgcgatcaagatcaaggcggccaaggtccctaaatttagg
cctggcaaagctctgaaggatgcgctaaactaa
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