Paraburkholderia xenovorans LB400: DR64_4552
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Entry
DR64_4552 CDS
T03290
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DR64_4552 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_4552 (xth)
Enzymes [BR:
bxb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DR64_4552 (xth)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DR64_4552 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AIP37874
UniProt:
Q13Q74
LinkDB
All DBs
Position
2:complement(107794..108606)
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AA seq
270 aa
AA seq
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MAKLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAADSAFPVEQLRDAGYGAIWQ
GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYLEAAVGGIVVACLYLPNGNPQPGPK
FDYKLAWFDHLIRHAAKLYRSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERY
RQLLAQGWTDALRTRFGNERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGVDR
WVRGEPHASDHAPTWVELEMGAGRRKKSGA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagcttcgaatcgcaaccttcaatatcaacgggatccgctcgcgcctgccggcg
ctcttgcaatggctcgaacgcgaggcgcccgacattgtctgtttgcaggaattgaaggcg
gcggacagcgcctttcccgtcgagcaactgcgtgacgccggctatggcgcgatctggcaa
ggtcagagcgcatggaacggcgtggcgatcctgtcgaaaggcgaggcgccgctggagagc
cgccgcggcctgcccggtttcgaggacgacacgcacagccgctatctcgaagccgctgtc
ggcggcatcgtggtggcgtgcctctatctgccgaacggcaatccgcaaccggggcccaag
ttcgactacaagctcgcgtggttcgatcatctgatcaggcacgcggcgaagctgtacagg
agcggtcatccggtcgtgctggcgggcgacttcaacgtggttcccaccgacgaagacatc
tacaacccgcgctcctggctgaaggacgcgttgctgcaacccgagagccgcgagcgctac
cggcaactgctcgcgcagggctggaccgacgcgctccgaacgcgtttcggcaacgaacgg
gtctacaccttctgggactatttccgccggcattgggagaccaattccggtttgcgtatc
gaccatctgctgctgagcgccgacctcgcgccgcgcttgcgcgatgcgggcgtggaccgc
tgggtgcgtggagagccgcacgcgagcgatcatgcgccgacgtgggtcgaactggagatg
ggcgcgggacgccgcaagaaaagcggcgcatga
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