Paraburkholderia xenovorans LB400: DR64_5565
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Entry
DR64_5565 CDS
T03290
Name
(GenBank) sensory box protein
Organism
bxb
Paraburkholderia xenovorans LB400
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
GAF_2
HisKA
GAF
PAS_3
PAS_4
GAF_3
PAS
PAS_9
PAS_11
SPOB_a
B12-binding
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIP36980
UniProt:
Q13JL7
LinkDB
All DBs
Position
2:1275096..1280051
Genome browser
AA seq
1651 aa
AA seq
DB search
MSRRVEEIALKEPDRFVSDESPDGFDAPSFLAGGGELGALIRAYDWTQTALGPPENWPQG
LKIAIRIMLTSRQPIWIGWRDELLYFYNDPYKSIIGGKHPAALGQPTKVVWREIWTDIEP
LLNTALAGAEGIFVEQKLLIMERNGFPEETYYTFSYSPIPGDDGEPGGIICANSDGTAQV
VGERQLALLKELAAVSPNGRDWRHACELSARALQANPQDLPFALLYAAEPGSDTVALVGA
CGIEPGHAAAPQTMKLDGEALWPVVDVFDTQAPRLVGDLTQRFGTALPSGPWHIPPQQAV
ILPVSPGSESTQTVVLVAGLNPCRLFDDAYRSFLNLAAGQIGAAIGYARAYEEERRRAEA
LAEIDRAKTTFFSNISHEFRTPLTLMLGPLEELLAKPQLAAGGDNARVGSDIEDRALIEI
THRNGLRLLKLVNALLDFSRIEAGRMQIHMQPTDVASFTAELASLFQSAIEAAGLRLEVE
IPAAPVVVQLDREMWEKVVMNLLSNAYKFTFFGTIRVAVRVVAGAGVEVSVTDSGIGIAE
EEVPRLFERFHRVAGAPGRSVEGSGIGLAMVQELVKLHGGTVRVDSALGEGACFTVSLPH
GAVPAQPDEESVHAAMSRHARTYVDAALRWSPENEIVADAPAETALAGAAPPIAAPVAAA
RLLVVDDNADLREYMSRILRAAGHEVRLATDGQAALEAARQERPDLVLSDVMMPRLDGFG
LLRALRADPELRDTPVLMLSARAGEEARVDGIEHGADDYLTKPFSARELLARVSGNLQLA
RLRRETETKLREESRTLEILNRVGSTVAAELDLNRAVQIVTDAATELTGAAFGSFFYNVL
DDKGGSYMLYTLSGVPKETFGQFPMPRNTAVFAPTFMGEGIVRVSDITQDPRYGHNAPHR
GMPEGHLKVRSYLAAPVQSRSGEVVGGLFFGHPEPGVFTERAERIVAGVAAQAAIAIDNA
RLYQAAQTEIAERTKAQSALHDLNETLERRVIETVADRDRLWELSEDLLVVADIEGRLQR
VSPSWSNALGHNTHWLMSRSYVDLVHPDDVEVVRAHLAELRRTGVPVRYENRFKRIDGTW
RWVAWTLALDPDTARIHGVGRDVTADKETTEALRHAEEALRMAQKMEAIGKLTGGVAHDF
NNLLQVIGGNLQLLAKDVAGSEKPEQRVRNALAGVARGANLASQLLAFGRRQPLAPKVVN
LGRFVRGLDDMLRRALGDGVEIETIVSGGLWNTLVDPFQVENALLNLAINARDAMNGHGK
LTIEAGNAALDDAYAKRNAEVTPGQYVMLAVTDTGAGMPPEVRERVFEPFFTTKPEGQGT
GLGLSMVYGFVKQSGGHVKIYSEEGHGTTIRIYLPRVREQEDLETNIDAGPAKGGTETVL
VVEDDEEVRTTVVEMLSDLGYRVLKAKDAQSALAIVESGVPIDVLFTDVVMPGPLRSTEL
ARKARERLPAIAVLFTSGYTDNAIVHSGRLDEGIELLSKPYTHEALARKIRYVLQTQNPQ
AAEIAEAGQHLLDIDPPAMPDSADSADSVAAQPRPRILLVEDDELVRASTAELLRMFEFD
ILEAEGEHDAKQILSEHAISVMLTDVGLAGKSGVDLALEVCAGRPDLRVIFLTGYDLVLT
PEQRKVLPHAILLRKPYDLLDLIDALKTPLR
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcgcgtcgaggagatcgcgttgaaagagccggaccgttttgtgtcggatgaa
tcgcccgacggctttgacgcgccgtccttcctcgccggcggcggcgagctgggcgcgctc
attcgcgcttacgactggacgcagacggcgctcggcccgcccgagaactggccgcaaggg
ctgaagatcgcgatccgtatcatgctcacgtcgcgccagccgatctggattggctggcgc
gacgagctactctatttttacaacgacccatataaatcgatcattggcggcaagcatccg
gccgcgctcgggcagccgaccaaagtcgtgtggcgcgaaatctggaccgatatcgagccg
cttctgaataccgcgctggcgggcgccgaaggcatcttcgtcgaacagaagctgctcatc
atggagcgcaacggctttcccgaagagacgtattacaccttctcgtacagcccgattccc
ggcgacgacggcgaacccggcggcatcatctgcgccaacagcgacggcacggcgcaggtg
gtgggcgaacggcaactggcgctgctgaaggaactggcggcggtcagcccgaacggccgc
gactggcgccacgcgtgcgagctcagcgcgcgggccttgcaggctaacccgcaagacctt
ccgttcgctctgttgtatgccgccgagccgggcagcgacaccgtcgcgctggttggcgcg
tgcggcatcgagccgggccacgccgcggctccgcaaaccatgaagctcgacggcgaggcg
ctgtggcccgtcgtcgacgtgttcgatacccaggcgccgcggctggtgggtgatctgacc
cagcgtttcggcaccgcgttgccgagcggtccgtggcatatcccgccgcagcaggcggtc
atcctgccggtgtcgcccggcagcgaatcgacgcaaacggtggttctggtcgccggcctg
aatccttgccgtcttttcgacgacgcctatcgcagtttcctgaacctggccgccggtcag
atcggcgcggcgatcggttacgcgcgggcgtacgaggaggagcggcggcgcgcggaagcg
ctggccgaaatcgaccgcgcgaagaccacgttcttctccaacatcagccacgaattccgt
acgccgttgacgctgatgctcggcccgctcgaagaactgcttgccaagccgcagctggcc
gcaggcggcgacaacgcgcgggtaggcagcgacatcgaggaccgcgcgctgatcgagatc
acgcatcgcaacggcttgcggctgctgaagctcgtcaatgcgctgctggacttctcgcgc
atcgaggcgggacgcatgcagattcacatgcaacccaccgatgtcgcgtcgttcacggcc
gaactcgcttcactgttccagtccgcgatcgaggcggccggcctgcggctcgaagtggag
attccggccgcacccgtggtcgtgcagctcgaccgcgagatgtgggaaaaggtcgtgatg
aacctgctgtcgaacgcgtacaagttcacgttcttcggcacgattcgcgtcgcggttcgc
gtggttgccggcgccggtgtcgaggtcagtgtgacggatagcggcatcggtattgccgag
gaagaagtgccgcgcctcttcgaacgctttcatcgcgtggcgggcgcgccgggacgctcg
gtcgaaggcagcggcatcgggctcgcgatggtgcaggaactggtgaagttgcacggcggc
acggtgcgggtggacagtgcgctcggcgaaggcgcgtgcttcactgtctcgctgccgcac
ggcgccgtgccggcccagcccgatgaagaatccgtgcatgccgccatgagcaggcacgcg
cgcacctatgtcgatgccgcgttgcgctggagtcccgagaacgagatcgtcgccgacgca
ccggccgagacggcactggccggcgcggcgccgcccatagccgcgcccgtcgccgccgcg
cggctgctggtcgtcgacgacaacgcggatctgcgcgagtacatgagccgtatcctgcgc
gcggcgggccacgaggtgcggcttgccaccgacggccaggccgcgctcgaagccgcgcgg
caggagcgccccgatctcgtgctctccgacgtgatgatgccgcgcctcgacggcttcggc
ctgctgcgcgcgttgcgcgccgatccggagttgcgcgatacgccggtgctgatgctgtcc
gcccgcgcgggcgaggaagcgcgcgtggacggcatcgagcacggtgccgacgactatctg
accaagcccttctcggcgcgcgaactgctggcccgcgtgtcgggcaacctgcaactcgcg
cgcctgcgccgcgagaccgagacgaagctgcgcgaagaatcgcgcactctggagattctc
aatcgcgtcggctcgacggtggcggccgaactcgatctgaaccgcgcggtgcagatcgtg
accgacgcggccaccgaactgaccggcgccgcgttcggttcgttcttctacaacgtgctc
gacgataagggcggcagctacatgctttacacgctgtccggcgtgccgaaggaaaccttc
gggcagtttccgatgccgcgcaacacggcggtgttcgcgcctacgttcatgggcgaaggc
atcgttcgtgtcagcgacatcacgcaggatccgcgctatggccacaacgcgccgcatcgc
ggcatgccggaaggtcatctgaaggtgcgcagctatctggccgcgcccgtgcagtcgcgc
agcggtgaagtggtcggcgggctgttcttcggtcatccggagcccggcgtgtttaccgaa
cgcgccgagcggatcgtggccggcgtcgccgcgcaggccgccattgccatcgacaacgcg
cgtttgtaccaggccgcgcaaaccgaaatcgccgagcgcaccaaggcccagagcgcgctg
cacgatctgaacgaaacgctggagcgccgcgtgatcgagacggtggcggaccgcgaccgt
ctgtgggaattgagcgaggatctgctggtggtggccgatatcgaaggccgcttgcagcgc
gtgagtccgtcatggagcaacgcgctcggtcacaatacgcattggctgatgtcgcgttcc
tatgtcgacctggttcacccggatgatgtagaggtggtccgcgcccatctggccgaactg
cggcgcacgggcgtgccggtgcgttatgaaaaccgcttcaagcggatcgacggcacgtgg
cgctgggttgcgtggacgctcgcgctcgatcccgacacggcgcgcattcacggcgtgggc
cgcgacgtcacggccgacaaggaaaccaccgaggccttgcggcacgccgaagaagcgctg
cgcatggcgcagaagatggaagcgatcggcaagctcacgggcggcgtcgcgcacgacttc
aacaacctgctgcaggtgataggcggcaatctgcaactgctggcgaaagacgtcgccggt
tccgagaagcccgagcagcgcgtgcgcaatgcgctggcaggcgtggcccgcggcgcgaac
ctcgcctcgcaactgctggcgttcgggcggcgtcagccgctggcgccgaaggtcgtcaat
ctgggccgcttcgtgcgagggctcgacgacatgctcagacgcgcgcttggcgacggcgtc
gaaattgaaacgatcgtctcgggcggcttgtggaatacgctggtcgatccgttccaggtc
gagaacgcgctgctgaatctggcaatcaacgcgcgcgacgccatgaacgggcatggcaag
ctcaccatcgaagccggcaatgccgcgctcgacgacgcctacgccaagcgcaacgccgag
gtcacgccggggcagtacgtgatgctggcggtcaccgacacgggtgccgggatgccgccg
gaagtgcgcgagcgcgtgttcgagccgttctttacgaccaagcccgaaggtcagggcacg
ggtctcggcttgagcatggtgtatggcttcgtcaaacagtccggcggccacgtgaagatt
tacagcgaagagggtcacggcacgacgattcgcatctatctgcctcgggtgcgcgagcag
gaagacctcgaaacgaatatcgacgccggtcccgccaagggcggcacggaaaccgttctg
gtggtcgaagacgacgaggaagtgcgcaccacggtggtcgaaatgctttccgatctcggc
taccgtgtgctgaaagcgaaagacgcgcaaagcgcgctcgcgatcgtcgaaagcggcgtg
ccgatcgacgtgctgttcaccgacgtggtgatgcccggcccgctgcgcagcaccgaactc
gcccgcaaggcgcgcgaacgcttgcctgcgatcgcggtgctgttcacgtcgggctatacg
gataacgcgatcgtgcattccgggcgactcgacgaaggcattgaactgctcagcaagccc
tacacgcacgaagcgttggcgcgcaaaatccgctacgtgctgcaaacgcagaatccgcag
gcggccgaaatcgccgaggccggccagcaccttctcgatatcgatccgccagccatgccg
gatagcgccgatagcgccgatagcgtcgccgctcagccgcggccgcggattctgctggtg
gaggacgacgagctggttcgcgcgagcaccgctgaattgctgcgcatgttcgaattcgac
attctggaggccgaaggtgagcacgacgcaaagcagattctcagcgagcatgcgatcagc
gtaatgctgaccgacgtggggctggcgggcaagtcgggtgtcgatctcgcgctggaggtg
tgtgccgggcggcccgatctgcgcgtgatctttctgaccggctacgacctcgtgctgacc
ccggagcagcgcaaggttttgccgcacgctatcctgctgcgcaagccgtacgatctgctc
gatctcatcgatgcgctgaaaacgccgctgcgctag
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