Paraburkholderia xenovorans LB400: DR64_6284
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Entry
DR64_6284 CDS
T03290
Name
(GenBank) D-ala D-ala ligase family protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00280
Valine, leucine and isoleucine degradation
bxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DR64_6284
Enzymes [BR:
bxb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
DR64_6284
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
BT_MCC_alpha
ATP-grasp_3
HlyD_3
ATPgrasp_ST
GARS_A
ATP-grasp_4
GCV_H
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
AIP35748
UniProt:
Q13LP8
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All DBs
Position
2:2096949..2098988
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AA seq
679 aa
AA seq
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MFNKILIANRGEIACRVAATCKRLGIASVAVYSDADANAKHVAACDEAVHIGGSSAAESY
LRVERIIEAARATGAQAVHPGYGFLSENEDFAQACEAAGIVFIGPPVEAIAAMGSKAAAK
ALMHAAAVPLVPGYHGDDQDAQLLHREANAIGYPVLLKASAGGGGKGMRVVERSEDFAAA
LASCKREAASSFGNDRVLIEKYLTRPRHVEVQVFADRHGGAVYLFDRDCSVQRRHQKVLE
EAPAPGLSAEIKREMGEAAVAAARAVNYVGAGTVEFIMTSTGEFYFMEMNTRLQVEHPVT
EMVTGQDLVEWQLRVAADQPLPLTQEQLKIDGHAIEARIYAEHPARGFLPSTGTLKHLRM
PEGVEFAIDASGLGEPGRKAPVRIDSGVREGDTITPFYDPMIAKLIVHGATREEALARLS
RALHACEVVGPHTNVEFLQSIVASEPFATGDLDTGLIERHHDALFAPRKKPYKEALALAC
AALLTREGGTAHGASPWDALSHWRLNGGYTQTLGWRDIDSGGESAGLFTVTFARDGGTQT
LEHDGVREDFKWSDGSGPHEFRATIVDARATGRVFVDGDTFHVFCLGEALAFEWQNLLAH
AADAEGGEGRLTAPMPGKVIAVLVEPGTVVEKGTPLIVMEAMKMEHTIGAPAAGTVSEVL
YAVGDQVADGAQLLVLDVQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcctgattgccaaccggggcgagattgcgtgccgcgtcgccgcgacc
tgcaagcggctcggcatcgcgagcgtggccgtctattccgatgcggacgccaacgcgaaa
cacgtggccgcctgtgacgaggcggtgcatatcggcggttcgagcgcggcggaaagttat
ctgcgcgtcgagcgcatcatcgaggccgcacgcgccaccggcgcgcaggcggtgcatccg
ggctatggctttctgtcggagaatgaagatttcgcgcaagcgtgcgaggcggccggcatc
gtctttatcggaccgccggtcgaagccattgccgcaatgggatcgaaggccgccgcaaag
gcgctgatgcatgcggccgccgtgccgctcgtgccgggttatcacggcgacgatcaggac
gcgcaactgctgcaccgcgaggcgaatgcgatcggttatccggtgctgctcaaagccagc
gccggcggtggcggcaagggcatgcgggtggtggagcgcagtgaggatttcgcggcggcg
ctcgcgtcgtgcaagcgcgaagccgcgagcagcttcggcaatgatcgcgtgctgatcgaa
aagtacctgacgcggccgcgtcacgtggaagtgcaggtgttcgcggatcgccacggcggc
gcggtctatctgttcgatcgcgattgttcggtgcagcggcgtcaccagaaagtgctggag
gaagcgccggcgcccggcttgtccgctgaaatcaagcgcgaaatgggcgaggccgcggtg
gccgccgcgcgcgcggtgaattacgtcggtgcgggcacggtcgagttcatcatgaccagc
acgggcgagttctacttcatggaaatgaacacgcgcctgcaggtcgagcatccggtcacg
gaaatggtgaccggccaggacctggtggaatggcaactgcgtgtggccgctgatcaaccg
ctgccgctcacgcaggaacagttgaagatcgacgggcacgcgatcgaagcgcgtatctac
gccgagcatccggcgcgcggctttctgccgtcgacgggcacgctcaaacatctgcgcatg
ccggaaggcgtggaattcgcaatcgatgcgtcgggcctcggcgagccgggacgcaaggcg
ccggtgcgtatcgacagcggcgtgcgtgaaggcgacaccatcacgccgttttacgatccg
atgatcgccaagctgatcgtgcacggcgccacgcgcgaagaggcgctcgcgcgcctgagc
cgcgcgctgcatgcgtgcgaggtggtcggcccgcataccaacgtcgagtttctgcagagc
attgttgcgagcgagccgtttgcaacgggcgatctcgacacgggcctgatcgagcgccat
cacgacgccctgttcgcgccgcgcaagaagccgtacaaggaagcgctggcgctcgcctgc
gcggcgctgctcacgcgcgagggcggcacggcgcacggcgcgtcgccgtgggatgcgttg
tcgcactggcgtctgaatggcggctatacgcagacgctcggctggcgcgacatagacagc
ggcggcgagagcgcgggcctgttcacggtcacgttcgcgcgcgacggcggcacgcaaacg
ctcgaacacgacggcgtgcgtgaggacttcaaatggtcggacggcagcggcccgcatgaa
ttccgcgcaacgatcgtcgacgcgcgcgcaacgggccgcgtgttcgtcgacggcgatacg
ttccatgtgttctgcctcggcgaagcgctggcgttcgaatggcaaaacctgctcgcccac
gccgcggacgccgaaggcggcgaaggccgtttgaccgcgccgatgccgggcaaggtgatc
gcggtgctggtggagccgggtaccgtggtggagaagggcacgccgctcatcgtgatggaa
gcgatgaagatggagcacaccattggtgcgccggctgcgggtacggtctcggaggtactg
tatgcggttggcgatcaggtggccgatggcgcgcagcttctggtgctggacgtgcagtag
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