Paraburkholderia xenovorans LB400: DR64_6470
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Entry
DR64_6470 CDS
T03290
Symbol
gmr
Name
(GenBank) cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DR64_6470 (gmr)
Enzymes [BR:
bxb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DR64_6470 (gmr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS_4
PAS
PAS_8
PAS_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AIP37539
UniProt:
Q13M85
LinkDB
All DBs
Position
2:complement(2292092..2294095)
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AA seq
667 aa
AA seq
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MNDDQHDQVLFAQFGTSSPCWRLSNDSNALELTPVTGDVPANVAIPLNPQQASQIRCLTG
VTSHLVLDVRLFGEPLRLHLVGKKLTSNSWAGTASAYDDTESVARDLVHGLSFAEQVVSE
VNSVVVILDRHGRIQRFNRLAEELTGVKEENIIGRNVWALFMSTEDGAASSQNIAGFFNR
GVSYEVERRIKTVHGERLFLFRNKFVHSGSGVEEQFLICSGTDITEERLAQERLTELANT
DSLTGLANRNAIQDRIRAAIEDATPGEAVGVLFLDLDNFKKVNDHYGHVFGDRLIRDVSS
AISLCLNEGDTLARLGGDEFIVLAARGTAHELEVTAQRILERMRTPFSLGLVEVYTGCSI
GIARYPEHGDSLESLIRSADTAMYVAKDEGKRTHRVFSPEMNRKVAEYMWLDTNLRRGLD
EGQLTLHYQPKLSLATGVVQGAEALVRWNSPERGQIMPTKFIRYAEESGLIGVLGRWVME
TAAKQAAKWKADGYNLRIAINVSARQLVDTAVVRHFSEALQHANLDPCLIDLELTESCLI
EDETAAIDLIKQFRQLGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVRSINADPKAQ
ALVRSMVVVAQELNFKVVAEGIETESEELFMRGLGVDYVQGFLYGQAMPAAEFERWLQDR
QKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaccaacacgaccaggtgctttttgcgcagttcggcacaagcagcccatgc
tggcgtctgtcgaacgacagcaacgcgctcgaactcacgcccgtgaccggcgacgtgccc
gccaatgtcgccattccgctgaatcctcaacaagcctcgcaaatccgctgcctcaccggc
gtcacctcgcatctcgtgctcgacgtgcggctattcggcgaaccgttgcgtctgcacctg
gtgggtaaaaagctcaccagcaactcctgggccggcaccgcctcggcctatgacgacacc
gagtccgtcgcgcgcgatctggtccacggtctttcgttcgccgaacaggttgtctccgaa
gtgaattcggtcgtcgtgatcctcgaccggcacggccggatacagcgcttcaaccggctc
gcggaagaactcaccggcgtcaaggaagagaacatcatcggccgcaacgtgtgggcgctg
ttcatgtctactgaagatggcgcggcgtccagtcagaacattgcgggcttcttcaatcgc
ggcgtgtcgtacgaagtcgagcggcgcatcaaaacggtgcacggcgaacggctctttctg
tttcgcaacaagttcgttcacagcggcagcggcgtcgaagaacagttcctgatctgctca
ggcacggacatcaccgaagaacggctcgcgcaggaacgcctcaccgaactcgcgaacacc
gactcgctcaccggcctcgcgaaccgcaacgcgatccaggacaggatccgcgccgccatt
gaagacgccacgccgggcgaagcggtcggcgtgctgttcctcgacctcgacaacttcaag
aaggtcaacgatcactacggccacgtcttcggcgaccgcctgattcgcgacgtatcgtcg
gccatcagcctctgtctgaacgaaggcgatacgctcgcgcgactcggcggcgacgaattc
atcgtgctcgcggccaggggcacggcgcatgaactcgaagtcaccgcgcagcgcattctc
gaacgcatgcgcacacccttcagcctcgggctcgtggaggtctacacgggctgctcgatc
ggcatcgcgcggtatccggaacacggcgacagcctcgaatcgctgatccgttcagcggac
accgccatgtacgtcgccaaagacgaaggcaagcgtacgcaccgcgtgttctcgccggag
atgaaccgcaaggtcgccgagtacatgtggctcgacaccaacctgcggcgcggcctcgat
gaaggccaactgacactgcattaccagccgaaactgtcgctcgccaccggcgtggtccag
ggcgccgaggcgctggtgcgctggaattcgccggagcgcgggcagatcatgcccaccaag
ttcatccgttatgcagaagagtcgggtctgattggcgtgctgggccgctgggtcatggaa
acggccgcgaaacaggccgccaaatggaaagcggacggctacaacctgcgcatcgcgatc
aacgtgtcggcgcggcaactcgtcgacacggcggtggtccgccatttcagcgaggcgctc
cagcatgcgaacctcgacccctgtctgatcgatctcgaactgaccgagagttgcctgatc
gaagacgaaacggccgcgatcgatctgatcaagcaattccgccagctcggcgctcaggtt
catctggatgacttcggcacgggttattcgtcgctgtcgcaactcggccgtattccgctc
gacgtgatcaagctcgatcgcagcttcgttcgctcgatcaacgccgaccccaaagcgcaa
gcgctggtgcgctcaatggtggtcgtcgcgcaggagctgaatttcaaggtggttgccgaa
gggatcgaaaccgagtcggaagaattgttcatgaggggtctgggcgtcgattacgtgcag
ggttttctgtacggccaggccatgccggcggctgaattcgagcgctggttgcaggataga
cagaagctcagactgattgcctga
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integrated database retrieval system
