Paraburkholderia xenovorans LB400: DR64_6480
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Entry
DR64_6480 CDS
T03290
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxb03032
]
DR64_6480
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_6480
Enzymes [BR:
bxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DR64_6480
DNA replication proteins [BR:
bxb03032
]
Prokaryotic type
DNA Topoisomerases
DR64_6480
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DR64_6480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AIP36951
LinkDB
All DBs
Position
2:complement(2305772..2306941)
Genome browser
AA seq
389 aa
AA seq
DB search
MRHADDTKPGFTRKRENGEFVYFDVAGKRIDDEDEIRRINALAIPPAYENVWICPDARGH
IQATGRDARGRKQYRYHPRWRETRDADKYERMAEFGRALPKIRARVARDLNLPGMQRDKV
IAAIVQLLDTTLIRIGSVEYARDNQSYGLTTLRKKHVKIEAGRLRFRFRGKSGIEHDVTV
NNPRIRRIVRRCAELPGHDLFQYLDEDGTRRTVGSADINDYLRRASGADFTAKDYRTWAG
SVYALAALRRLICSSAAEARRHIVATVKDVAALLRNTPAVCKRCYIHPAVISAFEADELQ
SLAPGQSRRGLRVDEVAFAALLAHAEKRAARLARQAGAKGRKARESAVTESIDTSVTSLL
KKSRKVGKAAAAKADIKAGAQTARAAAHV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccatgccgacgacacgaaaccgggcttcacgcgcaagcgtgaaaacggcgaattc
gtctatttcgacgtggcgggcaaacgcatcgacgacgaagacgaaatcaggcgcatcaac
gcgctcgccattccgcccgcctatgaaaatgtatggatctgcccggacgcccgcggccat
atccaggcgaccggacgcgacgcgcgcggacgcaagcaataccgctatcacccgcgctgg
cgcgagacacgcgacgccgacaaatacgagcgcatggccgagttcggccgcgcattgccg
aagatccgcgcgcgtgttgcgcgcgatctgaatctgccgggcatgcaacgcgacaaggtc
atcgccgcgatcgtgcagttgcttgacacgacgttgatccggatcggcagcgtcgaatac
gcgcgcgataatcagtcgtacggattgactacgctgcgcaagaagcacgtgaagatcgaa
gcgggccggctgcgtttcaggtttcgcggcaagagcggcattgaacacgacgtgacggtg
aacaatccgcgcatcaggcgcattgtgcggcgttgcgccgaactgccgggccacgacctg
ttccagtatctcgacgaagacggcacgcgccgcaccgtcggctccgccgacatcaacgac
tacctgcgccgtgcgagcggcgcggatttcaccgccaaggactaccggacgtgggccggc
agcgtctatgcgctggccgcgctgcgacggctgatttgcagcagcgcggcggaagcgcgc
cgccacatcgtcgcgactgtcaaggacgtggctgcgctattgcgcaataccccggccgtg
tgcaagcgctgctacattcacccagcggtgatcagcgcattcgaagcggacgaattgcag
agtctggcgccgggccagtcgcgccgtggactgcgagtggacgaagtggcgtttgccgcg
ttgcttgctcacgccgagaagcgcgcggcaaggctcgcgcggcaggcaggggcgaaaggc
cgcaaggcgcgtgagtcggcggtgacggaaagcatcgatacgtcggtcacgagcttgctg
aaaaaatcgcggaaggtaggtaaggcggcggctgcgaaggctgatataaaggccggcgcg
caaaccgcccgcgctgcagcgcatgtctag
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