Paraburkholderia xenovorans LB400: DR64_6520
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Entry
DR64_6520 CDS
T03290
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bxb03000
]
DR64_6520 (prpR)
Transcription factors [BR:
bxb03000
]
Prokaryotic type
Helix-turn-helix
Other families
DR64_6520 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
PAS
AAA_2
AAA_16
PAS_4
AAA_3
PAS_7
HTH_Tnp_ISL3
HTH_23
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIP35571
LinkDB
All DBs
Position
2:2350403..2352400
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AA seq
665 aa
AA seq
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MSTFTSSFTNPDSGRPGVALVSISRLRSLCETVAPRYAGRAKFFSVREGYGAAVTALQAY
VEAGSVDVVLAAGSNGAYLRDHLNVPVVMVKVNGFDVLGAITRATTTWPNAQIGLVLHET
ISHELSDLSAWLKVSLKQRAYRSIDEVRLAVDNLAAEGCGVIIGPGMACDFAQQAGLASV
FLYSLGAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAAFDEAGQVEAVNPAML
DLLGLDRERDVAGQVERAVGPLLRETLEHDMPIEERIEQIGGRALIVNCLPIVEQGVRSG
SVVTLQDALVAQRIDRSLRTSQRPKHLVARHRLDDLIGNSAALERVRRLARAGAAHDATV
LLSGESGTGKELVAQGIHNASSRRGNPFVAFNCAALPEGLIESELFGHEEGAFTGARRGG
KPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGRATPVDVRVIAATHRD
LHALVEQGAFRADLYFRLNLLQIELPPLRERREDVPQLARHLLSRSALQYGLSEVAIERV
LAFLAPLFAHYAWPGNVRELENLLTRAAIYPGGEAGLDWQAVFPEFGRMEQRPAGGASGA
GGPSGANGSSGSHATAQTTPARVSPTREDVLHALEKAGGNRAAASRALGIGRTTLWRLMK
DPSSE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactttcacgtcatcgtttacgaatcccgattcgggccgcccgggcgtcgcactg
gtgagtatcagccggttgcggtcgctttgcgagaccgtcgcgccacgctacgccgggcgc
gcgaaattcttttcggtccgggaaggctacggcgccgccgtcaccgccttgcaggcgtac
gtggaggccggttcggtggacgtggtgctggccgccggatcgaacggcgcctacttgcgc
gaccacctgaacgtgccggtggtgatggtcaaggtgaacggcttcgacgtgctgggcgcg
atcacccgggccacgaccacatggcccaatgcgcagatcggcctcgtgctgcacgaaacg
atctcgcacgagctgagcgacctgagcgcctggctgaaagtcagcctgaaacagcgcgcg
taccgctcgatcgacgaagtgcggctcgcggtcgacaacctcgccgccgaaggctgcggc
gtcatcatcgggcccggcatggcctgcgattttgcccagcaggcgggcctcgcgagcgtt
ttcctgtactcgctcggcgcggtcgaagaagcgttcgagcgctcggtcgaactggcgcgc
gtgagccgccagaaggaatcgaagcgcgtgcgcctgaatacgatcgtggcgcatctgcgc
gacggcgtcgccgccttcgacgaagccggccaggtcgaagccgtcaatccggccatgctc
gatctgctgggccttgaccgcgagcgggacgtggccgggcaggtggagcgtgccgtcggg
ccgttgctgcgcgagacgctggagcacgatatgccgatcgaagaacggatcgagcagatc
ggcggccgcgcgctgatcgtcaactgcctgccgatcgtggagcagggcgtgcgctccggc
tcggtcgtgacactgcaggacgcgctggtcgcacagcggatcgaccgctcgctgcggacc
agccagcggccgaagcatctggtcgcgcggcatcgactggacgatctgatcggcaactcg
gcggcgctcgaacgggtgcggcggctcgcgcgcgccggcgcggcgcacgacgccaccgtg
ctcctcagcggtgaaagcggaaccggcaaggaactggtcgcgcaaggcatccacaacgcg
agctcgcggcgcggcaatccgttcgttgcgttcaattgcgcggcgctgcccgaggggctg
atcgaaagtgaactgttcggccacgaagaaggcgcgttcaccggcgcgcggcgtggcggc
aagccggggctcttcgaaatcgcccacacaggaacgattttcctcgacgaaatcggcgag
atgccggcggcgctgcaaagccgtctgctacgggttctgcaggagcgcgaggtgatgaag
ctcggctcggggcgtgccacgccggtcgacgtgcgggtaatcgccgccacccaccgcgac
ctgcatgcactggtcgagcagggcgcgtttcgtgcggatttgtattttcgtctgaatctg
cttcagatagaattgccgccgctacgcgaacggcgtgaagatgttccgcaactggcgcgg
cacttgttaagccgcagcgcgctccaatatgggctgtcggaggttgcgatcgagcgggtg
ctggcgttcctcgcgccgctgttcgcgcactacgcgtggcccggcaatgtgcgggagctg
gaaaatctgttgacgcgcgccgcgatctatcccggcggcgaagccggcctggattggcag
gcggtgtttccggagttcgggcgcatggagcagcggccggccggcggcgcaagcggcgca
ggcggtccaagtggggcgaacgggtcgagcggctcacatgccaccgcccaaaccaccccg
gcgcgcgtaagcccgacccgtgaggacgttcttcacgccctcgaaaaggccggcggcaac
cgcgccgcggcaagccgggcgctgggaatcggccggacgaccttgtggcggctcatgaaa
gacccttccagcgaatga
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