Paraburkholderia xenovorans LB400: DR64_67
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Entry
DR64_67 CDS
T03290
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR64_67 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxb03021
]
DR64_67 (rho)
03019 Messenger RNA biogenesis [BR:
bxb03019
]
DR64_67 (rho)
Transcription machinery [BR:
bxb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DR64_67 (rho)
Messenger RNA biogenesis [BR:
bxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DR64_67 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
AIP30790
UniProt:
Q13Z82
LinkDB
All DBs
Position
1:75807..77075
Genome browser
AA seq
422 aa
AA seq
DB search
MHLSELKTLHVSELIEMANGLEIESANRLRKQELMFAILKKRAKTGDTIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKVLLLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVVLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEMKNDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPEVLQKIWVLRKFIHDMDEVESMEFLLDKIRQTKSNSEFFDMMRRGG
GS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagcttaagactctgcacgtgtccgaattgatcgagatggccaatggc
ctcgagatcgaaagtgcgaaccgcctgcgcaagcaggaattgatgttcgccattctaaaa
aaacgagccaaaacgggcgacacgatcttcggcgacggcacgctcgaagtgctgccggac
ggcttcggcttcctgcgttcgccggaaacctcgtacctcgccagcacggatgacatttac
atcagcccgtcgcaaatccgccgcttcaacctgcatacgggcgacacgatcgaaggcgaa
gtgcgcacgccgaaagacggcgaacgctatttcgcgctggtgaaggtggacaaggtcaac
ggccagccgccggaggcctcgaagcacaagatcatgttcgaaaacctgacgccgctgcac
ccgaacaaggtgctgctgctcgaacgtgaaatgcgtggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaaaggccagcgcggcctgctggtcgcctcgccg
aagtcgggcaagaccgtgatgcttcagcacatcgcccacgcgatcaagcagaaccatccg
gatgtcgtgctgttcgtgctgctgatcgacgaacgcccggaagaagtgaccgaaatgcag
cgttcggtggcgggcgaagtgatcgcctccacgttcgacgaaccggctgcgcgtcacgtg
caagtggccgaaatggtgatcgaaaaagccaagcgcctcgtcgaaatgaagaacgacgtg
gtgattctgctggactcgatcacgcgtctcgcgcgtgcgtacaacaccgtcgtgccggcc
tcgggcaaggtgctgaccggtggtgtcgacgccaacgcgctgcaacgtccgaagcgtttc
ttcggcgcggcacgcaatatcgaggaaggcggttcgctgaccatcatcggcacggcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagaattcaagggcaccggcaac
atggaagtgcacctggagcgtcgccttgctgaaaagcgcgtttatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaactgctgatcaagccggaagtgctgcaaaagatc
tgggtgctgcgcaagttcattcacgacatggacgaagtcgagtcgatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacatgatgcgccgtggtggc
ggcagctaa
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