Paraburkholderia xenovorans LB400: DR64_6888
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Entry
DR64_6888 CDS
T03290
Symbol
glyA2
Name
(GenBank) serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00260
Glycine, serine and threonine metabolism
bxb00460
Cyanoamino acid metabolism
bxb00630
Glyoxylate and dicarboxylate metabolism
bxb00670
One carbon pool by folate
bxb00680
Methane metabolism
bxb01100
Metabolic pathways
bxb01110
Biosynthesis of secondary metabolites
bxb01120
Microbial metabolism in diverse environments
bxb01200
Carbon metabolism
bxb01230
Biosynthesis of amino acids
bxb01240
Biosynthesis of cofactors
bxb04981
Folate transport and metabolism
Module
bxb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DR64_6888 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
DR64_6888 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DR64_6888 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DR64_6888 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DR64_6888 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DR64_6888 (glyA2)
Enzymes [BR:
bxb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DR64_6888 (glyA2)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
AIP36044
UniProt:
Q13NG0
LinkDB
All DBs
Position
2:complement(2772637..2773911)
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AA seq
424 aa
AA seq
DB search
MSNPNPFFEESLATRDTAVRGAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEYADVIETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALVKPGDTV
LGMSLDAGGHLTHGAKPAMSGKWFNAVQYGVNRDTMLIDYEQIEELAQQHKPALLIAGFS
AYPRALDFARLRAIADSVGAKLMVDMAHIAGVIAAGRHQNPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFKTYIDSVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKSLKGNQVEQALERAGITCNKNGIPFDTEKPT
ITSGIRLGTPAGTTRGFGMSEFREVGRLIVEVLDALRDHPEGHAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaatcctttcttcgaagaatcgctggccacgcgcgatacggcggtgcgc
ggcgctattttgaaagagctcgagcgccagcagtcgcaagtcgaactgatcgcgtcggaa
aacatcgtgtcgcgcgcggtgctcgaagcgcagggctcggtgttgaccaacaagtatgcg
gaaggttatccgggcaagcgttactacggcggttgcgaatatgcggacgtgatcgaaacg
ctggcgctcgatcgcatcaagcagctcttcaacgcgaagtttgccaacgtgcagccgcat
tccggcgcgcaggcgaatggcgccgtgatgctcgcgctggtcaagccgggcgacacggtg
ctcggcatgtcgctcgacgcgggcggccacctcacgcacggcgcgaagccggccatgtcg
ggcaaatggttcaacgcggtgcagtacggcgtcaatcgcgacacgatgctgatcgactat
gagcagatcgaggaactcgcgcagcagcataaacccgcgctgctgatcgccggcttctcg
gcttatccgcgtgcgctggatttcgcgaggctgcgggcgattgccgacagcgtcggcgcc
aaactgatggtggatatggcgcatatcgccggcgtgatcgcggcggggcgtcatcagaat
ccggtcgaacatgcgcatgtggtcacgtcgaccacgcacaagacgctgcgcggcccgcgc
ggcggcttcgtgctgacgaatgacgaggacatcgcgaagaagatcaactcggcggtattt
cccggcttgcagggcggcccgctgatgcatgtgattgccggcaaggcggtcgcgttcggc
gaggcgctgcaacccggtttcaagacttatatcgatagcgtgctcgccaatgcgcaagcg
ctcggcgaggtgctgaaggccggcggcgtggatctggtgacgggcggtacggacaaccat
ctgctgctggtcgatctgcggcctaaaagcctcaagggcaatcaggtcgagcaggcgctg
gaacgcgcgggcattacctgcaacaagaacggcattccattcgacaccgaaaagcccaca
atcacctccggcattcgcctcggcacacccgcgggtacgacgcgcggcttcggcatgagc
gaattccgcgaagtcggccggctgatcgtcgaggtgctcgacgcgctgcgcgaccacccg
gaaggccacgccgccaccgaacaacgcgtgcgccgcgagattttcgcgctgtgcgaacgc
tttcccatctactga
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