Paraburkholderia xenovorans LB400: DR64_7022
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Entry
DR64_7022 CDS
T03290
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00521
Streptomycin biosynthesis
bxb00523
Polyketide sugar unit biosynthesis
bxb00525
Acarbose and validamycin biosynthesis
bxb00541
Biosynthesis of various nucleotide sugars
bxb01100
Metabolic pathways
bxb01110
Biosynthesis of secondary metabolites
bxb01250
Biosynthesis of nucleotide sugars
Module
bxb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
bxb_M01026
dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DR64_7022 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DR64_7022 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DR64_7022 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DR64_7022 (rfbB)
00525 Acarbose and validamycin biosynthesis
DR64_7022 (rfbB)
Enzymes [BR:
bxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DR64_7022 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AIP35712
UniProt:
Q13NT7
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All DBs
Position
2:2922279..2923340
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLRLHDEPLVNVDKLTYAGNLGTLKSRQHDPLHIFVRADICD
RSALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALGEA
GKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIASALAGKALPVYGDGQNVRDWLYVGDHCSAIREVLAR
GTPGETYNVGGWNEKKNLEVVHTLCDLLDRLRPKAGASYHDQITYVKDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVRWYLDNQAWSNEVASGEYRKWVETNYAQRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtaacgggcggcgccggttttatcggcgccaatttcgtgctcgactggctg
cggctccatgacgaaccgctagtgaatgtcgacaagctgacttatgcgggcaatctcggt
acgctgaaatctcggcagcacgatccattgcatattttcgtgcgcgcggatatctgcgat
cgcagcgcgctcgacgcgttgttcgccgagcacaagccgcgtgccgtgctgcactttgcc
gcggaaagccacgtggaccgttcgattcatggcccggctgatttcgtgcaaacgaacgtg
gtcggcaccttcacgctgctcgaggcaacccgtcagtactggaacgcgctcggcgaagcc
ggcaaggccgcattccgcttcctgcacgtttcgaccgacgaagtattcggctcgctgtcc
gctaccgatccgcagttctccgaaaccacgccgtatgcgccgaacagtccttactcggcc
accaaggccggttccgaccatctggtgcgcgcctaccatcatacgtatgggctgccggtg
ctgaccacgaactgctcgaacaactacggtccgtaccagttccccgaaaagctgattccg
ctgatgatcgccagtgcgctcgccggcaaggcgctgccggtctacggcgacggccagaac
gtgcgcgactggctgtacgtgggcgaccactgcagcgcgatccgcgaggtgctcgcgcgc
ggcacacccggcgagacgtacaacgtgggcggctggaacgagaagaagaacctcgaagtg
gtccacacgctgtgcgacctgctcgaccggttgcgtccgaaggcgggcgcgtcgtaccac
gaccagatcacgtatgtgaaagatcgtccgggccacgaccgccgttatgcgatcgacgcg
cgcaagctcgaacgtgaacttgggtggaagcccgcggaaacgttcgaaacgggtctcgcg
aagacggtccggtggtatctggacaatcaggcgtggtcgaacgaagtcgcctcgggcgag
taccgcaagtgggttgagaccaactacgcgcagcgcgcgtaa
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