Paraburkholderia xenovorans LB400: Bxe_A0045
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Entry
Bxe_A0045 CDS
T00340
Name
(GenBank) Primosomal protein n
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bxe_A0045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A0045
Enzymes [BR:
bxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bxe_A0045
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bxe_A0045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
AAA_30
Zn_ribbon_6
ADDB_N
Zn-ribbon_GIR1
AAA_19
DUF5817
Motif
Other DBs
NCBI-ProteinID:
ABE32882
UniProt:
Q13SQ7
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All DBs
Position
1:complement(4797168..4799411)
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AA seq
747 aa
AA seq
DB search
MFVRVALDHPLPTLFDYRCDTPERVAPGMLVSVPFGKRHVVGLICEVTAHSDVPPDRLRA
INSVCTACPPVSSEWLRLAAFAADYYQRGLGEVALPALPQALRDASRWSRLFAPQERYSL
TPTGRTALPDALPARASALRKLAQALAETEFLVAAEVRALHPKAITTLDAWQAEGWVALE
LIEAAAELAAPASPDAPAPMPTLPTLTDEQAAAVEAIRDANGFAPFLLHGVTGSGKTEVY
LRALAEILAARPDAQALVLVPEINLTPQFEAAFRARFAALEGASIVTLHSGLAEGERARS
WFAAHTGRARIVLGTRLAVLASLPKLAIIVVDEEHDPAYKQQEGLRYSARDLAIYRAKQL
GLPVVLGSATPSLESWWQADQGRYKRLTLSRRAVADAVLPTVRLIDLEEERRRGRASVEG
LSGPLIAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERALR
CHHCGWEARIPRSCPECGNVDIAPMGRGTQRVEETLASAVPGARVLRIDADSTRRKGSAQ
ALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLMQVS
GRAGRAGLPGEVLVQTRYPRHALYHALARHDYVGFANSTLAERRDAHLPPFVYQALLRAE
GRTLEAALAFLQQAAAGLAGIPAAERVTVYDAVPLTIVKVMHVHRAQLLIESASRGALHA
TLRAWQPLLRGMKGVLRWNLEVDPLDI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccgcgtcgcgctggatcatccgctgccgaccttgttcgactatcggtgcgac
acgcctgagcgggtggcgccgggcatgctggtcagcgtgccgtttggtaagcgccacgtg
gttgggcttatctgcgaagtgaccgctcacagtgacgtgccgcctgatcgccttcgcgcg
atcaatagcgtgtgcaccgcgtgtccgccggtatcgtcggaatggttgaggttggccgct
ttcgcggcggattactatcagcgtggcctcggcgaagtggcgttgccggctttgccgcaa
gcgctgcgcgatgcttcgcggtggtcgcggctgtttgcgccgcaggagcgttacagcctc
acgcccacaggccgaacggcactacccgacgcactgccggctcgcgcgagcgcgttgcgc
aagctggcgcaagcgttggccgagaccgagttcctggtggccgccgaggttcgcgcgctg
caccccaaggcgatcacgacgctcgatgcatggcaggcggaaggctgggtggcgctggag
ctcatcgaagccgccgccgagcttgccgctccggcctcgcccgacgcaccggcgcccatg
ccgacgctgcccacgctcaccgacgagcaggcggcggctgtcgaagccattcgcgacgcc
aacggttttgcgccatttctgctgcacggcgtgacgggcagcggcaagaccgaggtctat
ctgcgcgcactcgcggaaatcctggccgccaggcccgacgctcaggcgctcgtcctcgtg
cctgaaatcaatctgacgccgcagttcgaagcggctttccgcgcgcgtttcgccgcgctc
gaaggcgcgtcgatcgtcacgctgcacagcggtctcgcggaaggcgagcgcgcccgcagc
tggttcgccgctcacacagggcgggcccgcatcgtactcggcacccgcctggcggtgctt
gcctcgctgccgaagctcgcgatcatcgtcgtcgacgaggagcacgacccggcctacaag
cagcaggaaggcttgcgctattcggcgcgcgatctggccatctatcgcgccaagcagctc
ggattgccggttgtgctcggctcggccacaccgtcgctggaaagctggtggcaagccgat
caggggcgctacaagcggctcaccctgtcgcgccgggcggttgccgacgccgtattgccc
accgtcagactgatcgatctggaagaagagcggcggcgcggccgggcgtccgtggaaggg
ttgtcggggccgttgatcgccgcattgaaggcgcggctcgaacgcggcgagcaaagcctc
gtgttcctgaaccgtcgcggttacgcgccgcagcttgcctgcgacgcctgcggctgggtc
gccggttgtccgcgttgcagcgcctacgtggtgctgcataagcccgagcgcgcgctacgc
tgccatcactgcgggtgggaagcacgcattccgcgctcgtgcccggagtgcggcaacgtc
gacatcgcgccgatgggccgcggcacgcaacgcgtcgaagaaacgctggcgagcgcggtg
cccggcgcgcgggtattgcgtatcgacgccgacagcacgcgccgcaagggcagcgcacag
gcgctgttctccgacgttcacgcgggcgaggtcgacatcctcgtcggcacgcagatgatc
gccaagggccacgacttccagcgcgtgtcgctggtcggcgtgctgaacgccgacaccgcg
ctcttttcccacgacttccgcgcgagcgagcggcttttcgcgcaattgatgcaagtaagc
ggccgggcaggccgcgcgggtttgcccggcgaagtgctggtgcaaacgcgctatccgcgc
cacgcgctctaccacgcgctggcgcgccacgactatgtcggcttcgccaactccacgctg
gccgagcggcgcgatgcgcacttgccgccgttcgtgtatcaggccttgttgcgggccgaa
ggccgcacgctcgaggccgcgctcgcgtttctgcagcaggcggcggccggcctggccggc
attcctgccgccgaacgcgtgaccgtttacgacgccgtgccgctcaccatcgtcaaggtg
atgcacgtgcaccgcgcccagttgctgatcgagagtgcatcgcgcggcgcgttgcacgca
actttgcgtgcctggcagccgctgttgcgcggcatgaagggcgtgctgcgctggaatctg
gaagtcgatccgctcgacatctga
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