Paraburkholderia xenovorans LB400: Bxe_A0134
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Entry
Bxe_A0134 CDS
T00340
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe02020
Two-component system
bxe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bxe_A0134
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bxe_A0134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxe03021
]
Bxe_A0134
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bxe02035
]
Bxe_A0134
Transcription machinery [BR:
bxe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bxe_A0134
Bacterial motility proteins [BR:
bxe02035
]
Flagellar system
Flagellar assembly proteins
Stator
Bxe_A0134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
MarR
Motif
Other DBs
NCBI-ProteinID:
ABE32797
UniProt:
Q13SZ2
LinkDB
All DBs
Position
1:complement(4699562..4700296)
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AA seq
244 aa
AA seq
DB search
MYNAQGKISQADVLTKYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYASQRIRGAMLDELRSNDWLPRSLRRTSREVETAVHKVEQNLGRSASETEIAEH
LQMPLDEYQSMLQDLHGSQLIYYEDFDRSADDEPFLDRYCVDHSDPLSALLDDSLRSALV
EAIDRLPEREKLLMSLYYERGMNLREIGAVMEVSESRVCQLHSQAVARLRTRLREMAWAN
AEAT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgctcagggaaagatctcccaagccgacgttctgacgaagtacgcaccgctc
gtgcgtcgcctcggcttgcagctcgttgccaagatgccggcgagcgtcgatctcgacgat
ctgatccaggccggcatgatcggactgctggacgcggcaagccgctacaaggaagaccag
ggcgcgcagttcgagacctacgcgagccagcggattcgcggcgcgatgctcgacgaattg
cgcagcaacgactggttgccgcgcagcttgcggcgcacctcgcgcgaagtggaaacggcg
gtgcacaaggtggagcagaatctgggccgttcggcgagcgaaacggagattgccgagcat
ctgcaaatgccgctcgacgagtatcagtcgatgttgcaggatctgcacggcagtcaactg
atctattacgaagacttcgaccgttcggcggacgacgagccgttcctcgaccgctactgc
gtcgatcattcggacccgctgtcggcgctcctcgacgacagcctgcgctcggcgctggtg
gaggcgattgatcgcctgccggagcgcgagaagctgctgatgtcgctgtactacgaacgc
ggcatgaacctgcgcgaaatcggcgcggtgatggaagtcagcgagtcgcgggtgtgccag
ttgcacagccaggccgtggcccgtttgcgcacgcgcttgcgcgagatggcctgggcgaac
gccgaggcgacctga
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