Paraburkholderia xenovorans LB400: Bxe_A0340
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Entry
Bxe_A0340 CDS
T00340
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bxe_A0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxe03021
]
Bxe_A0340
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A0340
Enzymes [BR:
bxe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bxe_A0340
Transcription machinery [BR:
bxe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bxe_A0340
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bxe_A0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABE32593
UniProt:
Q13TJ6
LinkDB
All DBs
Position
1:complement(4500616..4501593)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEATAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgcagttgaatcgcttggtgagagccac
gcgaaagtggtcatggaaccgtttgaacgcggttacggccacaccttgggtaacgcgctc
cggcgcgtactgctgtcgtcgatgatcggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtgcatgagtattcgacgctcgacggtgtgcaagaggatgtggtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgttgtcaccgctggcgacatcgaactcgcacacgattgcgaagtg
atcaacccggatcacgtgatcgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggtggagaagggccgcggctatgtgccgggcaatgtgcgtcgttatggcgaagagtcg
gccaagatcatcggccgtatcgtgctggatgcgtcgttctcgccggttcgccgcgtgagc
tacgccgttgaaagcgctcgcgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaaccaacggtgtgatttcgccggaagaagcgatccgtcagtcggcgcgcattctg
gtcgatcaactgtcggtcttcgctgctctggaaggcaccgaagcaacggctgaagcgccg
tcgcgtgcgccgcagatcgatccgatcctgctgcgtccggttgatgatctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaacatttactacatcggcgacctgatccag
cgcacggaaaacgagctgctcaagacgccgaatctgggccgcaagtcactgaacgaaatc
aaggaagtactggcgtcgcgtggtttgacgctcggcatgaaactcgagaactggccgccg
gctgggttggacaagtaa
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