Paraburkholderia xenovorans LB400: Bxe_A0914
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Entry
Bxe_A0914 CDS
T00340
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03030
DNA replication
bxe03430
Mismatch repair
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bxe_A0914
03430 Mismatch repair
Bxe_A0914
03440 Homologous recombination
Bxe_A0914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxe03032
]
Bxe_A0914
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A0914
Enzymes [BR:
bxe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bxe_A0914
DNA replication proteins [BR:
bxe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bxe_A0914
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bxe_A0914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABE32031
UniProt:
Q13V58
LinkDB
All DBs
Position
1:complement(3879713..3880900)
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AA seq
395 aa
AA seq
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MPQSHASKVFFSMSEQFLSEPALDGPIVFVDLETTGGSTAEHRITEVGVVEVGPAGVSRW
SSLVDPQQPIPSFIQQLTGITNAMVRGAPTFEAIAPALFERLNGKLFVAHNASFDRGFLR
GEFRRAGLAFDPDVLCTVRLSRALFPAEKRHGLDALVERHTLVPSDRHRALADADLIWQF
WQRLHGLVPLDVLRAQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEQDLPLYVGRS
VRVRQRLRSHLTGERRSAKDIRLAQQVRRVEWRATGGELGAMLAEAQWIAALRPGHNRVP
RVAKSDPADAPWPFEGPIVFEEREEASQARAFHVVDRWRYVGHAASLAEAAGLHASSVAG
AFELSTYRILQSHLARGLRVMPLNVSSGTPVAKVA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcaaagccacgcgtccaaagtattcttttccatgtctgaacagtttttgtccgaa
ccggccctggatggtccgattgttttcgtcgaccttgaaacgaccggcggctcgactgcc
gagcatcgcatcaccgaggtcggggtggtcgaagtcggaccggccggcgtgtcgcgctgg
agcagtctggtcgaccctcagcagcccattccctccttcatccagcaactcaccggtatc
acgaatgcgatggtgcggggcgcgccgactttcgaggccatcgcccccgctcttttcgag
cgtctgaacggcaaactgttcgtggcgcataacgccagtttcgatcgcggctttctgcgc
ggcgagtttcgccgggcgggactggcgttcgatcccgacgtgttgtgcacggtgcgtttg
tcgcgcgcgctgttcccggcggaaaaacgccacggtctcgacgctttggtcgaacgtcat
acgctcgtgccgtccgatcgtcaccgcgcgctcgccgacgccgacctgatctggcagttc
tggcagcgtctacacggcctcgtgccgctcgacgtcctgcgcgcgcagatcgagcgcacc
acgcggcggtaccggcttgccggtgacatcacggaagatctgctcgacaccgcgcccgcg
ggctgtggcgtgtatgcgttctatggagagcaggacttgcctctgtatgtcgggcgaagc
gtgcgcgtgcgtcagcgactgcgttcacatctgaccggcgagcggcgctcggccaaagat
atccggcttgcgcaacaggtgcggcgcgtcgagtggcgggccaccggcggcgaattgggc
gcgatgctcgcggaggcacagtggatcgcggcgctgcgccccggccacaaccgggtgccg
cgtgtcgcgaagagcgatccggcggacgcgccctggccgttcgaggggccgatcgtattc
gaggagcgcgaggaggcctcgcaggcccgcgcgtttcatgtcgtcgaccgctggcgctac
gtgggccatgcggcgtcgctcgctgaggctgccgggttgcatgcgtcgagtgttgcggga
gcattcgaactgtcgacgtatcgcattttgcagagccatcttgcccgcggcctgcgggtg
atgccgttgaacgtgtcgagcggaacgcccgtggcgaaggtcgcttga
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