Paraburkholderia xenovorans LB400: Bxe_A1250
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Entry
Bxe_A1250 CDS
T00340
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03030
DNA replication
bxe03430
Mismatch repair
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bxe_A1250
03430 Mismatch repair
Bxe_A1250
03440 Homologous recombination
Bxe_A1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxe03032
]
Bxe_A1250
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A1250
Enzymes [BR:
bxe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bxe_A1250
DNA replication proteins [BR:
bxe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bxe_A1250
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bxe_A1250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABE31703
UniProt:
Q13W36
LinkDB
All DBs
Position
1:3540012..3540746
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AA seq
244 aa
AA seq
DB search
MRQLILDTETTGLNARTGDRILELGCVELVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFGEIADQFRDFIQGADLIIHNAPFDIGFLDVEFALLGLPPVSTYCGEIIDT
LARAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GESHAGGDARAPRVAIDSLDLVVITASDDELAAHQALLDGLDKAIKGTSVWRLEPAPAAD
EQTA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaactcatcctcgataccgaaaccaccggcctgaatgcccgcaccggcgaccgg
attctcgaactcggctgtgtcgagctggtgaaccgccggctcaccggcaacaacctgcac
ttctatatcaacccggaacgcgacagcgatccgggcgcactggccgtgcacggcctgacc
actgaattcctgagcgacaagccgaagttcggcgagatcgccgaccagttccgcgacttc
attcagggcgcggacctgatcattcacaacgcgccgttcgacatcggctttctggatgtc
gaattcgcgttgctgggcttgccgccggtgagtacctactgcggcgaaatcatcgatacg
ctggcgcgcgccaagcagatgttccccggcaaacgcaattcactcgacgcactgtgcgat
cgtttcggcatcagcaacgcgcaccgcacgctgcacggcgcgctgctcgactcggaactg
ctcgccgaagtctatctggcgatgacgcgcggccaggaaagcctcgtcatcgacatgctc
ggcgaatcgcacgccggcggcgatgcgcgcgcaccgcgtgtcgcaatcgattcgctggat
ctggtcgtcatcaccgccagcgacgacgaacttgccgcacaccaggcgctgctcgacggt
ctcgacaaggcgatcaagggcacaagcgtgtggcgcctcgaaccggcgccggccgcggat
gagcagaccgcttaa
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