Paraburkholderia xenovorans LB400: Bxe_A1627
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Entry
Bxe_A1627 CDS
T00340
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bxe_A1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A1627
Enzymes [BR:
bxe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Bxe_A1627
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bxe_A1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABE31328
UniProt:
Q13X61
LinkDB
All DBs
Position
1:complement(3113121..3113966)
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AA seq
281 aa
AA seq
DB search
MHAPVAKRAKAPRAKSNGALPAELAGDVRELARVTGEGHEGEVVRKTRASAAAGGEGASA
SEVAVPVQIGGLTPEVTRPAYWDKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLAR
SVVGQQISVASAQAAWAKVEAACPKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFV
SGALHVGKWTSMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVN
YFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPLPVDY
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgcgcccgtcgcgaaacgcgcgaaggcgccgcgtgcgaagagcaatggcgcattg
ccggctgaactggccggcgacgtgcgggaactggcccgtgtgacaggcgaggggcacgaa
ggcgaagtcgtgcgcaagacgcgcgcatccgctgccgcgggtggcgaaggggcgagcgcg
agcgaagtcgcggtgccggtgcagatcggcggtctcacgcctgaagtgacgcggcccgcg
tattgggacaaggcgtgtgccgacctcgtcaagcgcgaccgcattctgaagaagctgatt
ccgaagttcggtccggtgcatctgctgagccgcggcgatccgttcgtcacgctcgcgcgc
tcggtggtcggacagcagatttccgtggcctccgcgcaagcggcctgggcgaaagtcgag
gccgcctgtccgaagctggtgccgcagcagttcatcaagctcggtctggaaaagctgacc
acgtgcgggttgtccaaacgcaaggccgagtacgtgctcgatctcgcgcagcatttcgtt
tcgggtgcgctgcacgtcggcaaatggacgtcgatggaagacgaggcggtgattgccgaa
ctcacgcagattcgcggcattggccgctggaccgcggagatgttcctgatcttcaatctg
tcgcgcccggatgtcctgccgctcgacgacctcgggctgatccgcgcgatcagcgtcaac
tatttcagcggcgagccggtcacgcgcagcgaagcacgcgaggtcgccgccaactgggaa
ccgtggcgcaccgtcgccacctggtatatgtggcgtagtctcgacccgctgccggtcgac
tactga
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integrated database retrieval system
