Paraburkholderia xenovorans LB400: Bxe_A2361
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Entry
Bxe_A2361 CDS
T00340
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03030
DNA replication
bxe03430
Mismatch repair
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bxe_A2361
03430 Mismatch repair
Bxe_A2361
03440 Homologous recombination
Bxe_A2361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxe03032
]
Bxe_A2361
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A2361
Enzymes [BR:
bxe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bxe_A2361
DNA replication proteins [BR:
bxe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bxe_A2361
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bxe_A2361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
TsaE
Mg_chelatase
AAA_assoc_2
AAA_2
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABE30609
UniProt:
Q13Z80
LinkDB
All DBs
Position
1:2297245..2300118
Genome browser
AA seq
957 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGAVGAARAPGQSGAGGARRTGAPAVAAQQGASGSPVSQARAVAASGAVPGTSFE
AQVSAAAPGRETQPGNVVVADKGAVVGAVSVEPATRAVAQAGSTVEVPPAVGDVQAAAAD
SAQGAVAGQSPAAEPATVAGPAPVIDELNPAPASAAPAAPAPALAPWDDAPANPAAREAS
TTAGLDDPAAGEVSAAAGDNGSAASEASTTAGLDDPASNHVSVTAGLSDAASNEVSAAGL
NGAAPNEALTAAALEDEAPANEAPASSLSAPAAAAFARTEQAAAAATSQELPPAAATEPR
RAGGASAALDVLRSAGLKVSSDRGRASAAAAAKPATPKPATPRVVVPVPTPGAPRRAPQQ
DAAPAAPAARAAASASSSPGQRNGAEQNGASVPPWDDMPPPDEYMPLTAADEGYYGLPDE
GYMPVFDSGPDDVRVSAAPASTAAPVIDQRPLPPAVPLDPLGFKGDWPALAVDLPLKGIS
YQLAFNSELMALEGNTLKLNVPVPQYAEASQVAKLKTALADRLGHTVEVLVEVGPARRTA
AAHDAAMRAQRQQEAEREIGADPFVQSLIREFGASIVPGSIRPITPDAGSNGAPSVH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcttcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcaccatgcc
tatttgtttaccggcacacgcggcgtcggcaagaccacgctgtcgcgcatcttcgccaag
gcgctgaattgcgaaaccggcgtgacctccacgccgtgcggtgtatgccgcgcgtgccgc
gaaatcgacgaagggcgctttgtcgattatgtggagatggacgcggcgagtaatcgcggt
gtcgacgaaatggcggcgctgctggagcgcgccgtgtacgcaccggtggacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccaaccacgccttcaacgcgatgctg
aagacgctggaagaaccgccggcgcacgtcaaattcattctcgccaccacggatccgcaa
aagattccggtcacggtgctgtcgcgctgtctgcaattcaatctgaagcagatgcccgct
ggccatatcgtctcgcatctcgagcacattctcggcgaagagaaggtgccgtacgacgtc
caggcgctgcgcctgctcgcgcgcgcggcggacggctcgatgcgcgacgcgctctcgctg
accgatcaggcgattgcctactcggccaaccaggtcaatgaagaagcggtgcgcggcatg
ctcggcgcgctcgaccagagctatctgatccgcctgctcgacgccctcgctgacggcgac
ggcgccgcggtgctgtcggtggccgacgagatggcgttgcgcagcctgtcgttttcgacg
gcgttgcaggatctggcgagtctgctgcaccggattgcgtgggcgcagttcgcgccgtcg
tcggtgctggacgagtggcccgaggcgggtgatctgcgccgcttcgctgaagcgctgagc
gccgagcaggtgcaactgttctatcagatcgcgaccatcggccgaagcgaactgggtctc
gcgccggacgaatacgccggtttcaccatgacgctgctgcgcatgctcgcgttcgaaccg
gcgcctacgggcggcggtggtgccgtgggcgcggcgcgtgcgcctggccagtccggcgcg
ggcggagcgagacgcaccggtgcgccggccgtggccgcgcagcagggcgcgtcgggttcg
ccggtgtcacaggcgcgggcagtggcggcttcgggcgccgtgccggggacttcttttgaa
gcgcaagtgagcgccgctgcgccgggccgcgaaacacagccgggtaatgttgtcgtggct
gacaagggcgccgtggtcggcgcggtgtcggttgaacccgcaacgcgtgccgtggcgcaa
gccggcagcacggttgaagtgccgcccgcggttggcgacgttcaggctgcggcggcggat
tctgctcaaggcgcagtcgcagggcagtcgcctgccgcggaaccggcaacagttgcaggg
ccggcgccggttatcgatgaattgaatccggcgccggcgtctgcggcgcctgccgccccg
gcacccgcgttggccccgtgggacgatgcccctgccaacccggcagcgagagaagcttcc
acgaccgctggccttgatgatcctgccgcgggtgaagtctctgcagccgctggcgacaac
ggttcggcagcgagcgaagcctccacaactgccggcctcgacgatcctgcctcgaaccac
gtctccgtaactgctggtctcagcgatgccgcctcgaacgaagtctccgccgctggcctc
aacggtgcggccccgaacgaagccctcacagccgcagctctcgaggacgaagctcccgcc
aacgaagctcccgcgtcttcgctgagcgcacccgcagccgctgcgtttgcgcgcacggag
caagccgcggctgcggcaacgtcgcaagaactaccgcccgcagccgcaaccgaacctcgc
cgcgcgggcggtgcgagcgccgctctcgacgtgttgcgcagtgccggcttgaaagtgtcg
tcggaccgtggccgcgcgagcgcggccgccgccgcgaagcccgccacgccgaagcccgcc
acgccgcgcgtcgtcgttcccgtgccgacgccgggcgcgccgcgccgtgcgccgcagcag
gatgccgcaccggcagcacctgcggcgcgcgcggctgcatcggcgtcttcgtcgccgggc
cagcgcaacggcgctgagcagaatggcgcgtcggtgccgccgtgggatgacatgccgccg
cctgacgaatacatgccgctcacggccgccgacgaaggctattatggcctgccggacgaa
ggctacatgcccgtgttcgacagcggcccggacgatgtccgcgtgagcgccgcgcccgcg
tcgacggccgcgccggtgatcgaccaacgtccgctgccgcccgccgtgccgctcgatccg
ctgggcttcaagggcgactggccggcgcttgccgtcgacttgccgctcaagggcatttcg
tatcagctcgcgttcaacagcgaactcatggcgctcgaaggcaatacgctcaaactgaac
gtgccggtgccgcagtacgctgaagcctcgcaggtcgccaaactgaaaaccgcgctcgcc
gacaggctcggccacactgtcgaggtgctggtcgaagtcggtccggcgcgccgtacggcc
gccgcgcacgacgccgccatgcgcgcacagcggcagcaggaagccgagcgcgagatcggc
gccgatccgttcgtgcagtcgctgatccgcgagttcggcgcgagcatcgtgcccggctcg
atccgcccgattactccggacgccggttcgaacggcgcgccgtcggtccactga
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