Paraburkholderia xenovorans LB400: Bxe_A2837
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Entry
Bxe_A2837 CDS
T00340
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bxe_A2837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A2837
Enzymes [BR:
bxe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bxe_A2837
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bxe_A2837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
RecD_N
SLFN-g3_helicase
AAA_22
AAA_25
DEAD
MukB
T2SSE
CbiA
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ABE30126
UniProt:
Q140W3
LinkDB
All DBs
Position
1:1803918..1806032
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AA seq
704 aa
AA seq
DB search
MSTFEQSASAPPELDDIGVNLPAPADFSTALAEGFARRIGTLARRGGASAEAVKWAARGA
FAASRATAEGHVCVPLALLARRFEASGAEVRAALFASGMASDGSQSAAALRPLVVDGQGR
LYLARYYDYERRLARALVAHAGAGVGTRAAPGAEAGGNAQTLHERLLRYFGTPKDNEVDW
QRVAAVMALSGQLTIVSGGPGTGKTTTVVGVLACLLDARADLRIALGAPTGKAAQRMQEA
LLARAGDLPPELAARLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDVVVIDEASMIDVAM
AAHLLDALAPQTRLVMLGDKDQLAAVEAGAVFAELSARPAFTQEGVRRLAEALGIDETRL
TQALPHASRSLGEEQAGSFPQSNAPHGFEARPDDLFAYADSPEVFNEPLAGELSEGAASS
PGPAPHALNPLADCVVWLERNYRFGLESPIGRLSLAIRNGSSSAALDVLRIDPAESCAAA
LYEDTHATLAERTVARLAAGFAPYADALAAALAADTPDPLPLFDALNRFRILCATRSGPR
GVDQVNAAMAAQVRRSAGVTLAVGAQWFAGRPVMVTRNDYALGLFNGDIGIALPGASGAL
RVHFRTGDGGLRAVSPAALPPHDTAFALTVHKSQGSEFEHAVLMLPSAFSRVLSRELVYT
AITRARERVEVVGARAVLAQAIATPTQRDSGLAARIAEAWHGAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcgaacagagcgcatccgcgccgcccgagctcgacgatatcggcgtgaat
ttgccagcgccggccgatttcagcaccgcgctcgcggaaggtttcgcgcgtcgcatcggc
acgctggcgcggcgcggcggtgcatcggcggaggcggtcaagtgggcggcgcggggcgcg
ttcgccgcgagccgcgcaacggccgagggccatgtgtgcgtgccgctcgcgttgctggcg
cggcgcttcgaggcatcgggcgccgaagtgcgcgcggcgctgttcgcaagcggcatggcg
agcgacggctcgcaaagcgcggcagcgttgcggccgctggtggtggatgggcaagggcgg
ttgtatctggctcgctattacgactacgagcggcggcttgcgcgcgcgctggtcgcgcat
gctggagcgggggtcggtactcgcgccgctcccggtgctgaagcaggcggcaacgcgcag
actttgcacgagcgcctgctgcgctacttcggcacgccgaaagacaatgaagtggactgg
caacgtgtcgcggcggtcatggcgctgtcgggacaacttactatcgtcagcggcggaccc
ggtaccggcaagaccaccaccgtggtcggcgtgcttgcctgcctgctcgatgcgcgcgcg
gatctgcgaatcgcactgggggcgcccacgggcaaagcggcacaacgcatgcaggaggcc
ttgctcgcgcgtgccggcgatctgccgcccgaactcgccgcgcgtttgccgcagacgtcg
tacacgttgcatcgtctgctcggttccggaccgggcgggcgcttccggcatcatcgggac
aatccgctgccttacgatgtcgtggtgatcgacgaggcgtcgatgatcgacgtcgcgatg
gccgcgcatctgctcgacgcccttgcaccgcagacgcgtctcgtgatgctgggcgacaag
gaccagctggccgcggtcgaagccggcgcggtgttcgccgaactcagcgcgcgtccggcg
ttcacgcaagagggtgtgcggcggctcgcggaggcgctcggtatcgacgaaacacggctg
acgcaggcgttgccgcacgcgtcgcgcagcctgggcgaagagcaggccggttctttcccg
cagtccaatgcgccgcacggtttcgaagcgcggcccgacgatctgttcgcctatgccgac
tcgccggaggtttttaatgaaccgctcgcgggtgagctttctgaaggcgccgcgtcatcg
cccggtccggcaccgcacgcgctgaacccgctcgccgactgcgtcgtctggctcgaacgt
aactatcggttcggtctcgaatcgccgatcggccggctgtcactcgcgatccgcaacggc
tcgtcgagcgcggcgctcgacgtcctgcgcatcgatcccgcggaatcttgcgcagcggcg
ctttacgaagacacccatgcaacgcttgccgagcgcaccgtcgcgcgtcttgccgcaggc
ttcgcgccctacgccgacgcgctggccgcggcgctcgcagccgacacgcccgacccgttg
ccgcttttcgacgcgttgaaccgtttccgcattctgtgcgcgacccgttcggggccgcgc
ggcgtcgatcaggtgaatgcggcgatggcggcgcaggtgcggcgctcggccggtgtgacg
ctggcagtgggcgcgcagtggttcgccgggcgtcccgtgatggtgacgcgcaacgactat
gcactgggtctcttcaacggcgacatcggcattgcgctgccgggcgcgagcggcgcgttg
cgcgtgcatttccgtaccggcgacggcggcttgcgggcggtatcgccggcggcgcttccg
ccgcacgacaccgcatttgcgctcacggttcacaagtcgcagggctcggagttcgagcac
gcggtgctaatgctgccgtcggcgttcagccgggtgttgtcgcgcgagctggtgtacacg
gcgatcactcgcgcgcgcgagcgggtggaagtggtcggcgctcgcgccgtgctggcgcag
gccattgccacgccgacccagcgcgattcgggattggccgcgcgaatagcggaggcgtgg
cacggcgctgaatag
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