Paraburkholderia xenovorans LB400: Bxe_A2839
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Entry
Bxe_A2839 CDS
T00340
Name
(GenBank) Exodeoxyribonuclease V, RecC subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bxe_A2839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A2839
Enzymes [BR:
bxe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bxe_A2839
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bxe_A2839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABE30124
UniProt:
Q140W5
LinkDB
All DBs
Position
1:1796831..1800232
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AA seq
1133 aa
AA seq
DB search
MQTPGSMLQLFYSNRYETLVGALLDDLAQAPSDPWTAQPVIVPSAAVRRRLELDIATRQG
ICANVNFGYLAQWLWAQIGGVIEVPKHSPFAPDRLVWRCYRLLGPGNDGDEALPWNASPR
LRTYLDAADASMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAADDSGPRLVGA
SEAAREDERWQAALWRVVLAEVAGNGQTAAAALPPAYRFLDEIGTLDLEAISNAQWPEAV
SVFALPTMPPLHVALLRALSRWVDVRLYVMNPCREFWFDVVSEGRVQALDATGQLDYQEV
GHPLLAEWGRQTQAQLHMLHELTESAASGETGDFTENPQPSWLAAVQNGILDLRKETDTD
ELPSEQGIEVHVCHSLSRQLEVLHDRLLGWFDEFDDLQPSDVLVAVSDLAAAGPLIDAVF
GTTPPGDTRRIPYRITGLPPSQANPVARLLLDWLALPERSVGAPDLIEWLRVDAIAVRYG
IDASSLEAAQEWLAAAGARRGLAPVEPTGEHVPIARHTLADALTRLYLGYAMPDGGEPVD
AWLPVEGADGADAELLGRLSRFVDDIDSFAANCAVERTPAEWTQLLLDTLAQCFDGGVEF
ADSLAAVRDAIDKMGDAMQAGAQEIAMPAAVVRGALTEALDDPARGGVPWGSVTFSSLTS
LRGLPYRVVCLLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAARDR
LFIAYTGRSIRDNAPLPPAALVDELLDHLAQVSAGEGASPAEVESARHAFIVDHPLQAFA
SDYFSPQSGLFSYDADRAELATLLAAPAHPAAAPFFDRPLPPEEPAPIAFDEFVRFWRHP
ARALLRDRLGIVLSDAQGELLDTEPFELDYAGRDALADRLLPVLLGADTDDNVIFERVRR
VAAASPELPGGATGAVWRARELGALRQLADSVRREVASGVERLPFVLDIAPRWPENTEIA
GPLFGPHDALLRQAAQTPLQLHGSLNLLTETGQVIFRYAKPTARDYLSAWLAHLVYCAAR
PDGPRRTVWHGSGESFELTPVAAPLDELAPLAALFKAGRMLPLRFFPKSAWTRVSESESA
ALGVWINDRVRGESDDPALRIALRGTPLTLEEPFGSLAAIVFKPLIQHLRSAS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccccgggatccatgctccagctcttctactcgaaccgctacgaaacgcttgtc
ggcgcgctgctcgacgacctggcgcaagcgccgtccgacccctggaccgcgcagcccgtg
atcgttccgagcgctgccgtgcggcgccgtctcgagctcgatatcgccacgcgccagggc
atctgcgcgaatgtcaactttggttatctcgcgcaatggctgtgggcgcagatcggcggc
gtgatcgaggtaccgaagcattcgccgttcgcgcccgaccggctcgtatggcgctgctac
cggttgctgggcccggggaacgacggggacgaagcgctgccctggaatgcgtcgccgcgt
ctgcgcacgtatctcgatgcggcagacgcctcgatgcgctacgaactcgcgcggcgcgtg
gcgaccgtgctcgaccactatctgacgtatcggccggaatggctgctgcaatggcagaag
ggcggctcgatcttcgcgagcggtgcggcggacgactccggcccgcgtctcgtcggcgcg
agcgaagcggcgcgcgaagacgagcgctggcaagccgcattgtggcgcgtggtgctcgcg
gaagtggcgggaaacgggcaaacggccgcagccgcgttgccgcccgcttaccgttttctg
gatgaaatcggcacgctcgatctcgaagccatctcgaacgcacagtggcccgaggcggtc
agcgttttcgcgctgcccaccatgccgccgttgcacgtggcgctgctgcgcgcgctttcg
cgctgggtcgacgtgcgtctgtacgtaatgaacccgtgccgcgagttctggttcgacgtg
gtcagcgaagggcgcgttcaggcgctcgacgccaccggccagctcgactatcaggaagtc
ggccatccgctgcttgccgagtggggccggcagacccaggcgcagttgcatatgctgcac
gagctgaccgagagcgcggcctccggcgagaccggcgatttcacggaaaatccgcaaccg
agctggcttgccgccgtgcagaacggcatcctcgatctgcgcaaggagaccgacaccgac
gaactaccgagcgagcaaggcattgaggtccacgtctgccacagtctgtcgcggcagctc
gaagtgctgcacgatcgcctgctgggctggttcgacgaattcgacgatctgcaaccgtcc
gacgtgctggtcgccgtatccgatctcgcggcggccggccccctgatcgacgccgtgttc
ggcaccacgccgcccggcgacacgcgccgcattccgtatcggatcaccggcttgccgccg
tcgcaggccaatccggtcgcgcggttgctgctcgattggctggccttgcccgagcgcagc
gtgggcgcgccggacctgatcgaatggttgcgcgtcgacgccattgccgtgcgttacggg
atcgacgcgagttcgctcgaagccgcacaggaatggctggccgcggccggcgcgcgtcgc
gggctcgcaccggtggagccgactggcgaacatgtgccgatcgcgcgtcatacgttggcg
gatgcgcttacgcgtctgtatctcggctacgccatgccggacggcggcgaaccggtcgac
gcgtggctgccggtcgaaggcgccgacggcgcggatgccgaactgctcggccgcctgtcg
cgtttcgtggacgacatcgacagcttcgcggcgaattgcgcggtcgaacgcacgcctgcc
gaatggacccaactgctgctcgacacgctcgcgcagtgtttcgacggtggcgtcgaattc
gccgattcgctcgccgccgtgcgcgacgcgatcgacaaaatgggcgacgcaatgcaagcc
ggcgcgcaagagatcgcgatgcccgccgcggtggtgcgcggtgcgctgaccgaagcgctc
gacgacccggcgcgcggcggcgtgccctggggcagcgtgacgttttcgtcgttgaccagt
ttgcgcggcttgccgtatcgcgtggtgtgcctgctcggcatggacgacggtgtgctgccg
agcctcgcgcgcgccgacgagttcgatctgatggccgcgttcggcaaagccggcgaccgc
cagcggcgcgacgacgaacgcaatctgttcctcgatctgctgctcgccgcgcgcgatcgc
ctcttcattgcttatacgggccgcagcattcgcgacaacgcgccgttgccgccggccgcg
ctggtcgatgaactgctcgaccatcttgcgcaggtgtcggcgggcgagggcgcgagtccg
gccgaagtcgagagcgcgcggcatgcgttcattgtcgatcatccgttgcaggcgttcgca
tcggactatttctcgccgcaatccggtctcttcagctacgacgcggatcgcgccgaactg
gccacgctactggccgcgcccgcccatcccgctgccgcgcctttcttcgatcgacccttg
ccgcctgaagagccggcgccgatcgccttcgacgaattcgtgcgcttctggcgtcatccc
gcgcgggcgttgttgcgcgaccggctgggcatcgtgttgtcggacgcacagggcgaattg
ctcgacaccgagccgttcgaactggattacgccgggcgcgatgcattggcggatcgtctt
ctgccagtcctgctcggcgccgatacggacgacaacgtcatcttcgaacgcgtacgccgc
gtggcggcggccagcccggaattgccgggcggcgcgaccggcgcggtgtggcgcgcgcgt
gagctcggcgcgttgcgccagctcgccgacagcgtgcgccgcgaagtggcttcgggtgtc
gagcgtttgccgttcgtgctcgacatcgcaccgcgctggcccgagaacacggagattgcc
ggcccgcttttcggcccgcatgacgcgctgctgcggcaagccgcacaaacgccgctgcaa
ctgcacggcagtctgaatctgcttaccgaaacaggacaagtgattttccgctacgccaaa
cctaccgcacgcgactatctgtcggcgtggctcgcgcatctggtgtattgcgccgcacgg
ccggacggtccgcgccgcaccgtatggcatggcagcggcgagagcttcgagctcacgccg
gtcgccgcgccgctcgacgaactggcgccgcttgccgcgttgttcaaggcagggcgcatg
ctgccgttgcgctttttcccgaagagcgcgtggacccgggtcagcgaaagcgaatccgcg
gcgctgggcgtctggatcaacgaccgcgtgcgcggcgagtccgacgaccccgcgttgcgc
atcgccttgcgcggcacgccgctcacgctcgaagaaccgttcggcagtctcgccgcgatc
gtgttcaagccgctcatccagcatctgcggagcgcgtcatga
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