Paraburkholderia xenovorans LB400: Bxe_A3001
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Entry
Bxe_A3001 CDS
T00340
Name
(GenBank) UvrA family protein
KO
K03701
excinuclease ABC subunit A
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bxe_A3001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A3001
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bxe_A3001
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bxe_A3001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_21
AAA_29
SMC_N
AAA_16
nSTAND1
AAA_25
AAA_22
AAA_23
AAA_33
RsgA_GTPase
AAA_18
NACHT
Viral_helicase1
nSTAND3
UvrA_DNA-bind
nSTAND_NTPase5
ATPase
DnaJ_CXXCXGXG
SbcC_Walker_B
DUF4350
DUF87
RNA12
Motif
Other DBs
NCBI-ProteinID:
ABE29978
UniProt:
Q141L1
LinkDB
All DBs
Position
1:1594396..1600311
Genome browser
AA seq
1971 aa
AA seq
DB search
MAHSFRRSKKLASNGIIRIRGARQHNLKNVDLDVRTGEMTVVTGPSGSGKSSLVFDTLYA
EGQRRYVETFSAYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDH
LKLLYARAAELFDRKTARQVRHDTPETIYAELLERTAKNEPRLVVTFPVELPESASEQEV
EQWLSASGYTRVQAQREVDSPTGKRKLLDVVADRFRPRSVDKQRVVEAIEASLKRGGGRV
NVYVLPASSEGPEAQESEPEIWRFSTGLHSPESDLRYADPQPALFSFNSAYGACEVCRGF
GRVIGVDLGLVIPDARKTLRDGAIKPMQTPAWKECQDDLMRYAAKADIRRGTPWGELTDA
ERDWVINGSPDWNGKWQSHWYGVKRFFEYLESKAYKMHIRVLLSKYRSYTPCETCGGARL
KTESLLWRLGSKANADDVLPAGKRFLPRGVDWTREQLEALPGLTVHDLMLMPIERIRRFF
DEVSLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALG
TSLTKTLFVLDEPSIGLHPRDLNRIVEAMHRLRDAGNTLVVVEHDPSVMLAADRLIDMGP
GPGERGGSIIYDGVPEAIRSSGTLTGEYLGGRRHVADAAHWSQRPVNDATPRIVLEGATE
HNLRDVTVEIPLERLVCVTGVSGSGKSTLLQDVLYPAMARHFGLATESPGAFRSLSGADQ
VTDVVFVDQSPIGKTARSNPASYVGAFDEIRKLFARAPLAQQRGYGPGMFSFNSGDGRCP
TCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAELLEVKIERGEPARALSIADVLELTVSE
ATTFFAKDAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAQARTARS
AKQPVAKRLFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDL
GPEGGDGGGRVLCAGTPEDVKACPESHTGEALLQYDRAMNAAAEPASQGIPLQKALSAAR
ARRAVEGEDVVRIVNAREHNLKSLDVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRY
LESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYV
KLGLQHCIHDGTPVTSQSVESIAAQLLRDHKGQHVGFLAPLVVNRKGVYTDLAKWAKARG
NTHLRVDGEFVPVDPWPKLDRFREHTIELPVTDLVVSPDHEAELRQALDQTLEVGKGVMH
LLAPLDGLHDAMSGGRPTAQLGAVKVLSTKRACPVCGTSYPELDPRMFSYNSKHGWCTTC
VGTGLALTREQRAAYDDTIVVDDNRGREQSLPSEEQEPEGLVDEPCPDCAGTRLNPTARA
VTFDAQAIVDVAQWTVSDTRAWVDTLEMTGRDAEIARDVISEIGSRLQFLEEVGLGYLSL
DRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALRKLGEKGNT
LVVVEHDEDTIRRADHIIDIGPGAGKRGGTLVAQGSVADLSAQPDSVTGQFLANPIVHPL
QPRREVVAPGKRTAAVPENWLTVHGGKLHNLRNVTVGIPLSRLVAVTGVSGSGKSTLARD
VLMANLLDAVGRSVLSSPATRRARAAAEEKPAANRRSSVLARTAPRAQLNVTHAWQGCDS
ITGWETIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRKLFAGTLEARARGYTASRFSFNT
GEGRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGKNIGDVLTMEIDE
AVEFFAPISNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRG
QKPPHTLYVLDEPTVGLHMADVARLIRVLHRLADGGHSVVVIEHDLDVIAEADWIIDLGP
EGGVGGGSIVAATDPEGLARVAASHTGAALRPVLARSRDNDTIVAGEGTNG
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
gtggcccactcattcaggcggtcgaaaaaattggcatctaacggcattatcaggattcgc
ggcgcgcgccagcacaacctcaagaacgtcgacctcgacgtacgaaccggcgaaatgaca
gtcgtaaccggcccgtccggctccggcaagtcgagcctcgtgttcgacacgctttacgcg
gaagggcagcggcgctacgtcgaaacgttcagcgcttacgcacggcagtttctggaccgc
atggaccggccgcaagtcgaccgcgtggacggcgtgccgcccgccatcgcgatcgaccag
accaatccggtgcgcagttcgcgctccaccgtcggcaccatgacggagctcaacgatcac
ctgaagctcctctacgcgcgcgcggccgaactgttcgaccgcaagacggcccgccaggtg
cggcacgacacgccggaaacgatctacgccgaactgctcgagcgcaccgcgaagaacgag
ccgcggctcgtcgtcacgttcccggtcgaactgccggagtccgcgtcggagcaggaagtg
gagcagtggttgtcggcgagcggctacacgcgcgttcaggcacagcgcgaagtcgattcg
cccacgggcaagcgcaaactgctcgatgtggtggccgaccgcttccggccgcgctcggtg
gacaagcagcgagtggtcgaggcgatcgaggcgtcgctcaagcgcggcggagggcgcgtc
aatgtttatgtgctgccggcgtcgtcggaagggccggaagctcaggaaagcgaaccggaa
atctggcgcttctccaccggcttgcatagccccgaaagcgatctgcgctatgcggacccg
cagcccgcgctgttctcgttcaactcggcgtacggcgcgtgcgaagtctgccgcggtttt
ggtcgcgtgatcggcgtcgacctcgggctggtgattccggacgcgcgcaagacgctgcgc
gacggtgcgatcaagcccatgcaaacgccggcctggaaggaatgccaggacgatctgatg
cgctacgcggcgaaagcggatattcgccgcggcacgccgtggggcgagctgacggacgcc
gagcgcgactgggtcatcaacggctcgcccgactggaacggcaagtggcaaagccactgg
tacggtgtcaaacgcttcttcgaatatctcgaatcgaaagcgtacaagatgcatatccgt
gtgctgctgtccaaataccgcagctatacgccgtgcgaaacctgcggcggcgcgcgtctg
aaaaccgaatcgctgttgtggcgcctcggcagcaaagcgaatgcggacgacgtgttgccg
gccggcaagcgcttcctgccgcgcggcgtcgactggacgcgcgaacagctcgaagcgttg
ccgggtctgaccgtgcacgacctgatgctgatgccgatcgagcgtatccggcgcttcttc
gacgaagtcagcctgccgagcgcgctgctcgacgacgcgctcaaactgctgctcgccgaa
gtgcgcacgcgcctcaaatatctgtgcgacgtgggcctcggttatctcacgctcgaccgg
cagagccgcacgctgtcgggcggcgaggtgcagcggatcaatctgaccacggcgctcggc
acgtcgctcaccaagacgcttttcgtgctcgacgagccgagcatcggcctgcatccgcgc
gacctgaaccgcattgtcgaagccatgcaccgcttgcgcgacgcgggcaatacgctggtg
gtggtcgagcacgatccctcggtcatgctcgccgcggatcgtctgatcgacatgggcccg
gggccgggcgagcgcggcggctcgatcatttatgacggcgtgcccgaggcgatccgttct
tccggcacgctcaccggtgagtatcttggcggccgccggcatgtggcggacgcggcgcac
tggtcacagcgtccggtgaatgacgccacgccgcgcatcgtgctggaaggcgcgacggaa
cacaatctgcgcgatgtcacggtggagattccgctggagcggctcgtctgtgtgacgggg
gtatcgggttccggcaaatccacgctgctgcaagacgtgctgtatccggccatggcgcgc
cacttcggtcttgccaccgaatcgccgggcgcattcagaagcttgagcggcgccgatcag
gtcaccgacgtcgtgttcgtcgaccagtcgccgatcggcaagaccgcgcggtcgaacccg
gccagttatgtcggcgcgttcgacgaaatccgcaaactgttcgccagggcgccgctcgcg
cagcaacgcggctacggcccgggcatgttcagcttcaattcgggtgacggccgctgcccg
acgtgcggcggctcgggtttcgaacatatcgaaatgcagttcctgagcgacgtgtacctg
cgttgccccgattgcgacgggcgccgttatcgcgcggaactgctcgaagtaaagatcgaa
cgcggcgaaccggcgcgcgcgctgagcattgccgacgtgctggaactgacggtgagcgaa
gcaaccaccttttttgccaaagacgccgaagtgctgcgcgtgctgcagccaatcgtcgac
gtgggcctcgaatacgtgaagctcggccagccggtgcccacgttgtcgggcggcgaagca
caacggctcaaactcgccgggtttctcgcggaatcggctcaggcgcgcaccgcgcgcagc
gcgaagcagccggtcgcgaagcgtctgttcatgttcgacgaaccgaccaccggcctgcat
ttcgacgacatcgccaagctgatgcaggcgttcggcaaactgctcgcgagcggtcattcg
ctgatcgtgatcgagcacaacctcgacgtgatccgcgcggccgactggctgatcgacctc
ggtcccgaaggtggcgacggcggcggccgggtgctgtgcgccggcacgccggaagacgtc
aaggcgtgcccggaatcgcataccggcgaagcgctgctgcaatacgaccgcgccatgaac
gcggccgccgaaccggcgtcgcaaggcattccgctgcagaaggcgctgagcgcggcgcgt
gcgcgccgggccgtcgaaggcgaggacgtggtgcgcatcgtcaatgcgcgcgagcacaac
ctgaaatcgctggacgtggacattccgcacggcaaattcaacgtgattaccggggtctcc
ggttcgggcaagtccacgctcgccttcgacattctgttccatgaagggcagcgccgttac
ctcgaatcgctcaacgcctacgcgcgttccatcgtgcagcccgcggggcggcccgaggtg
gacgcggtgtacggcattccgccgaccgtcgcgatcgagcagcggctttcgcgcggcggc
cgcaagagcaccgtggcgactacgtccgaggtgtggcacttcctgcgtctgctgtatgtg
aagctcggtctgcagcattgcattcatgacggcacgccggttacgtcgcaaagcgtggaa
tccatcgcggcgcagttgctgcgcgatcacaaggggcagcacgttggttttctcgcgccg
ctggtcgtgaatcgcaagggcgtctataccgatctggcgaagtgggcgaaagcgcgcggc
aatacgcatctgcgtgtggatggcgaattcgtgccggtggacccgtggccgaagctcgac
cgcttccgcgagcatacgatcgagttgccggtgaccgatctcgtcgtgtcgccggaccat
gaagccgagttgcgtcaggcgctcgaccagacgctggaagtcggcaagggcgtgatgcat
ctgctggcgccgctcgacggtttgcacgacgcgatgagcggcggccgccccacggcgcaa
ctcggcgccgtgaaggtgctgtccaccaagcgcgcgtgtccggtgtgcggcacgagctat
cccgagctcgacccgcgcatgttctcgtataacagcaagcatggctggtgtacgacctgc
gtcggcacgggtctcgcgctcacgcgcgagcagcgcgccgcatacgacgacacgatcgtt
gtcgacgacaatcgcggccgcgaacagagcctgccttcggaagagcaggagcccgaaggc
ctcgtggatgaaccgtgtccggactgtgcgggcacgcgtctgaatcccactgcacgcgcg
gtcaccttcgacgcgcaggccattgtcgatgtcgcgcaatggaccgtgtccgacacgcgc
gcgtgggtcgacacactggaaatgaccggtcgcgacgcggaaatcgcgcgcgacgtgatc
agcgaaatcggcagccgcctgcagttcctcgaagaagtcggactcggctatctgagtctc
gatcgcgccgcgccgagtctctcgggtggcgaggcgcagcgtatccgtctcgcggcgcaa
ctcggcagcaatctgcaaggcgtgtgctacgtactcgacgaaccgaccatcggtctgcat
ccacgcgacaatcagattctgctgaacgctctgcgcaagctcggtgagaagggcaacacg
ctggtggtcgtcgagcacgacgaggacaccatccggcgcgccgatcacatcatcgacatc
gggccgggcgcgggcaagcgcggcggcacgctggtcgcgcagggcagtgtggcggacctg
tcggcgcaacccgattccgtgaccgggcagtttctcgccaacccgatcgtgcatccgttg
cagccgcgtcgtgaagtggtcgcgccgggcaagcgcacggccgcggtgccggaaaactgg
ctgaccgtgcacggtggcaaactgcacaacctgcgcaacgtcacggtcggtattccgctc
tcgcgattggtggcggtcacgggcgtcagcggttccggcaagtcgacccttgcacgcgac
gtgttgatggctaatctgctggatgcggtcgggcggtcggtgctgtcgtcgccggccaca
cggcgcgcgcgcgccgcggccgaggagaagccggcggcgaaccggcgctccagcgtgctg
gcgcgcacggcgccgcgcgcgcaattgaacgtgacgcatgcatggcaaggctgcgattcg
atcaccggctgggagactatcgaccgcgtactcgaagtcgatcaaacgccgatcggcaag
acgccgcgttcgtgtcctgccacttacatcggcgtatgggacgcgatccgcaagctgttc
gccggcacgctcgaagcgcgtgcgcgcggctatacggcctcgcgtttctcgttcaacacg
ggcgaaggccgttgcccggcctgcgaggggcagggcgtgcgcaccatcggcatgagcttt
ctgcccgatgtgaaagtgccttgcgatgtgtgtcacgggcagcgcttcaatcccgagacg
ctcgcggtcacatggcgcggcaagaatatcggcgacgtgctgactatggaaatcgacgaa
gccgtcgagtttttcgcgcccatctcgaacatcgcccatccgttgcagttgatgaaagac
gtcgggctcggctatctaacactgggtcaaccttcgcccacgttgtcgggtggcgaagcg
cagcgtatcaagctcgtcaccgaattaagcaaggtgcgcgacgacattacgcggcgcggt
cagaagccgccgcacacgttatatgtgctggacgaaccgaccgtgggcctgcatatggct
gacgtcgccaggctgattcgcgtgctgcatcgtctcgcggacggtggccatagtgtcgtc
gtcatcgagcacgatctggacgtgatcgccgaggcggactggatcatcgatctcggcccg
gagggtggcgtgggcggcgggtcgattgtcgccgccacggatcccgaaggactcgcccgc
gttgccgcaagtcatacaggcgccgcgttgcggcccgttctcgcgcgatcgcgcgacaac
gacaccatcgttgcgggcgaaggcacgaacggttga
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