Paraburkholderia xenovorans LB400: Bxe_A3354
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Entry
Bxe_A3354 CDS
T00340
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe00270
Cysteine and methionine metabolism
bxe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Bxe_A3354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bxe03000
]
Bxe_A3354
03032 DNA replication proteins [BR:
bxe03032
]
Bxe_A3354
03036 Chromosome and associated proteins [BR:
bxe03036
]
Bxe_A3354
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bxe02048
]
Bxe_A3354
Enzymes [BR:
bxe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Bxe_A3354
Transcription factors [BR:
bxe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Bxe_A3354
DNA replication proteins [BR:
bxe03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Bxe_A3354
Chromosome and associated proteins [BR:
bxe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Bxe_A3354
Prokaryotic defense system [BR:
bxe02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Bxe_A3354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_28
MerR_1
HTH_23
Terminase_5
MerR
HTH_36
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ABE29631
UniProt:
Q142V8
LinkDB
All DBs
Position
1:complement(1229362..1230618)
Genome browser
AA seq
418 aa
AA seq
DB search
MKTAAPHGLLKQTLQFYSQGEIAAHCGRNVRTIRRWEASGNCPVIAEATLREMLDIRTRK
APVERAPEFRLVDLFAGIGGIRRGFEAHGGRCVFTSEWNDFSKKTYQENYRDCDDAHQFV
GDIVSFDVASVPSHDVLLAGFPCQPFSIAGVSKKNSLGRPHGFECTTQGTLFYDVARIIA
AKRPAAFLLENVKNLLSHDKGKTFQTIIDVLRDELKYDVHYKVIDGQYFTPQHRERIVIV
GFREETEFTFDDLNVPAEGPRLASILHKTDGSEPVLAHDGDRFFDHASREVQPRYTLTAN
LWAYLQAYAAKHRAAGNGFGFGLVTPDSVTRTLSARYFKDGSEILCSQGKGKRPRRLTPR
ECARLMGFPDDFVIPVSDTQAYRQFGNSVVVPVMQEVARIMIPHVKGLLAQKVAGATS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggccgctccgcacggactgctcaagcagaccttgcagttctatagtcaagga
gagatcgccgcccactgtggaagaaacgtcagaactatccgtcgctgggaagccagtgga
aattgccccgtgatcgcggaagccacgctgcgggaaatgctcgatatcaggactcgcaag
gcgccggtcgagcgggcacccgaatttcgcctcgtcgacctctttgccggaatcggcggt
attcgccgcggattcgaagcgcacggcggacggtgtgtcttcacgagcgaatggaacgac
ttctcgaagaagacctatcaggaaaattaccgtgattgcgacgacgcccatcagttcgtg
ggtgacatcgtttcgttcgacgtcgcttccgtgccatcacacgacgtgctgcttgccggg
tttccgtgtcagcccttcagcatcgcgggcgtgagcaagaaaaattcgctcggccgtccg
cacggcttcgaatgcacgacacaaggcacgctcttttacgacgttgcacgcatcatcgcg
gcgaagcgcccggctgccttcctgctggagaacgtcaagaatctgctgtcgcacgataaa
ggcaaaaccttccagaccatcatcgacgtgctgcgtgatgaactcaaatacgacgtccat
tacaaggttatcgacggtcaatacttcacgccgcaacatcgggaacgcatcgtgatcgtc
ggttttcgcgaggagaccgaatttacgttcgacgacctgaacgtgccggccgaaggacca
cgccttgcttcgattctgcacaagaccgacggcagcgaaccggtgctggcgcatgacggc
gaccgtttcttcgatcacgcgtctcgcgaggtgcaacccaggtacacgctcactgcgaac
ctgtgggcctatcttcaagcttacgcggccaagcatcgggcggcgggcaacggtttcggg
ttcgggctggtcacgcccgacagcgtgacgcgcacgctgtcggcccgatatttcaaggac
ggctcggagatcttatgctcgcaaggcaaaggcaagcgtccgcgccgtttgacgccgcgc
gagtgcgcccggctaatgggttttcctgacgacttcgtgattccggtgagcgacacgcaa
gcctatcgccagttcggcaatagcgtggtggttccggtcatgcaggaagtcgcacgaatc
atgattccgcacgtgaagggactgctggcgcaaaaagttgccggcgcaaccagttga
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