Paraburkholderia xenovorans LB400: Bxe_B0404
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Entry
Bxe_B0404 CDS
T00340
Name
(GenBank) Phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bxe_B0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_B0404
Enzymes [BR:
bxe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bxe_B0404
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bxe_B0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
RecJ_C
Motif
Other DBs
NCBI-ProteinID:
ABE35542
UniProt:
Q13K47
LinkDB
All DBs
Position
2:complement(2923510..2924154)
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AA seq
214 aa
AA seq
DB search
MADDKQTRRSRSSAQSDPDVERDQQPATLDECRRCTLWRNATQAVPGEGPRRASIMLVGE
QPGDAEDLQGRPFVGPAGALLDKALEEAGLKRKDVYVTNAVKHFKWTPRGKRRMHKTPGQ
REIEACGYWLEQELRTVRARVIVALGATALKAVLDDSHARLQDALGKTIGHGEHLVVATY
HPSFALRAPDPETRRHVYDTIVAALQTADKLGHK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacaaacaaaccagacgttcgcgtagcagcgctcaatccgatccggatgtc
gagcgcgaccagcagccggcgacattggacgaatgccgccgctgcacgttatggcgtaac
gcgacgcaggcagtgcccggcgaaggaccgcggcgcgcgtcgatcatgctggtcggcgag
cagccgggggacgccgaagatctgcagggcaggcctttcgtcggaccggctggcgcattg
ctggataaagcgctcgaagaggccggactgaagcgtaaagacgtctacgtcacgaatgcg
gtcaaacatttcaaatggacgccgcgcggcaagcgccgcatgcacaaaacgccggggcag
cgagagatcgaggcatgcggatactggcttgaacaggaactgcgcacggtaagggcacgc
gtgatcgttgctttgggcgccacggcgttaaaagcggtactggacgattcacatgcgcgg
ttacaggacgcgctcggcaaaacgatcgggcacggcgagcacctggtcgtggcgacctat
catccgtcattcgcactgcgcgcgccggatcccgaaacccgtcgacatgtctatgacaca
atcgttgcggcgctccagacggcggacaagctagggcataagtga
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