Paraburkholderia xenovorans LB400: Bxe_B0966
Help
Entry
Bxe_B0966 CDS
T00340
Name
(GenBank) Putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
bxe
Paraburkholderia xenovorans LB400
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
HAMP
PAS_8
PAS
PAS_4
PAS_3
Cas10-Cmr2_palm2
Motif
Other DBs
NCBI-ProteinID:
ABE34988
UniProt:
Q13LQ1
LinkDB
All DBs
Position
2:2291213..2294392
Genome browser
AA seq
1059 aa
AA seq
DB search
MKRNLFFRFLGRLRVGRKLLLIYLLDLSAVLYISGILIHEKYIAIDFSDKELVGNAYVAA
VHDALVDFALAGAGKPQTPAQLQRTASWLADAERRYGANMQSAEINARVLAALTASAAPH
ASAATVDGGLEATRELVTRVGNQSNLILDPDLDSYYSMSLSILRYPELLSDVNRIGRHLH
DAGASLRTARMSHDEMRTRYLVLEGQLDAVLQGLRSDYAEAAATNATLTRTIGPPITHML
AAIDAYRRVAGAAVDAGSDAATLTALDAAQQGVVMSVSDAWSATGNQLERLLHERVRGLF
ERMWLHLGTALFLLCAILSMVYFVAQQISRPLRQLARVMDTVRRTGDHSLRARWHSQDEI
GQLVRGFNDMLAQLDRERDVQKELAATARASAAQYALVEATPVPMVVTAIPGHEVLHANK
PALYWLNGCTVDPWAVGLDSEVRARFFQQLSDREAVDEFEVHWKAAKESTWAMLSARRLD
FQGRDAVLTAFTPINQIKLMEQRLELWGKVFEASSEAILILDAQRRLVTANASFYRATGY
RADNVTGKEPAFLFGTQDHDDILPAVIDSVDRLSVWHGEAHVRRRAGSDYPAWLMVSAVR
DRRANLSHYICTLIDITDRKKSEARIQFLAEHDVLTELPNRELFVKRLGVVLGNARRTGQ
RVAVLFIDLDRFKNINDSLGHHIGDSLLRSVSRRLLQAVRTNDTVSRLGGDEFTVILNSV
SNAADVTRTIEERLLPLVRQPHEVGGVTLQVSCSVGVALFPDDGEDIETLMQNADAAMYQ
AKGAGRNLVKFFAPDIAERTRYRLTLEACLRSAIAMHEFRLEYQPCVDAHTGELVAVEGL
LRWNSPQIGIVSPAQFIPVAEDTRLIIPIGAWVINEACQQIAAWDAEGLTPLRVSINLSA
IQLRDPDLIGTLADSLARHGVAPWRLELEITETVLMDNAENYLTMINAIRALGVKLSLDD
FGIGYSSLSYLNRFPLDRLKIDRAFVLDMLDARADLAIVRAIIELGHELGLRVVAEGVES
EHQARILRTIGCDELQGFLFSKALSPADLWSWTNARKVA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaacctgttcttccggtttctcgggcgcctgcgcgtcggccgcaagctgctg
ctgatctatctgctcgacctgagcgcggtgctgtatatcagcggcatcctgatccacgag
aaatacattgcgatcgacttctccgacaaggagctggtcggcaacgcctacgtcgcggcc
gtgcacgacgcgctcgtcgactttgcgctcgccggggccggaaaaccgcagacgccggcc
caattgcaacgcacggcgagctggctcgccgacgcggagcgccgctatggcgcaaacatg
cagagcgcggaaatcaacgcgcgcgtgctggcggccctcacggccagcgcggcgccgcat
gcgagcgccgcgacggtggacggcgggctcgaagcgacacgcgaactggtgacgcgggtc
ggcaaccagtcgaacctgattctggacccggacctcgacagctactactcgatgtcgctg
tcgatcctgcgctatccggagctgctcagcgacgtcaaccggatcggccgccatctgcac
gatgccggcgcgagtcttcgcaccgcacggatgagccacgacgagatgcggacccgctac
ctcgtgctggaaggacagctcgacgcggtattgcaggggctgcgctccgactatgcggaa
gccgcggccaccaacgccacgctgaccagaaccatcggtccaccgatcacgcatatgctc
gccgcgatcgacgcgtatcgccgcgtggccggcgccgcggtcgatgccggctcggatgcc
gccacgctcacggcgctcgatgccgcgcagcagggcgtggtgatgagcgtgagcgacgcg
tggagcgcgaccggcaatcagctcgaaagactgctgcatgaacgcgtgcgcgggctcttc
gagcggatgtggctgcacctcggcaccgcgttgttcctgctgtgcgcgatcctcagcatg
gtgtatttcgtcgcgcagcagatttcgcggccactgcgccagctcgcgcgcgtgatggac
acggtgcggcgtacgggcgaccattcgctgcgcgccagatggcatagccaggacgagatc
ggccagctcgtgcgaggcttcaacgacatgctcgcgcaactcgatcgcgagcgcgacgtg
cagaaggaactcgcggcgacagcgcgcgcctcggccgcgcagtacgcattggtcgaggcg
actccggtgccgatggtcgtcacggcgatcccggggcatgaagtgctgcacgcgaacaag
cccgcgctttactggctgaatggctgcacggtcgatccgtgggccgtcggcctcgactcg
gaggtgcgcgcgcgcttcttccagcagctctccgaccgcgaggcggtcgacgaattcgag
gtgcactggaaggccgccaaagaatccacctgggcaatgctgtcggcgcggcgtctcgac
ttccaggggcgcgacgccgtgctgaccgccttcacgccgatcaaccagatcaagctgatg
gagcagcgcctcgaattgtggggcaaggtgttcgaagcgtcatccgaagccattctgatt
ctcgacgcgcaacggcggctcgtgaccgcaaacgcatcgttctatcgcgcgaccggctat
cgcgccgacaacgtgacgggcaaggaacccgctttcctgttcggcacgcaggaccacgac
gacattcttccggccgtgatcgattccgtcgaccgcctgagcgtatggcacggcgaagcg
cacgtacggcggcgcgcgggcagcgactatccggcgtggctgatggtgagcgcggtgcgc
gaccggcgcgcgaacctgtcacactacatctgcacactgatcgacatcacggaccgcaag
aagagcgaggcgcgcatccagttcctcgccgaacacgacgtgctgacggagctgccgaac
cgcgagctgttcgtgaagcgcctgggcgtcgtgctcggcaacgcgcgccgcacggggcag
cgcgtcgcggtgctgttcatcgacctcgaccgcttcaagaacatcaacgattcgctgggc
catcacatcggcgacagccttctgcgctcggtctcgcgacgcctgttgcaggccgtgcgc
accaatgacacggtgagccggctcggcggcgacgaattcacggtgatcctgaacagcgtc
agcaacgcggcggacgtcacgcgcacgatcgaggagcgtttgctgccgctcgtgcgccag
ccgcatgaggtcggcggcgtcacgctgcaggtgtcgtgcagtgtgggcgtagcgctgttc
cccgacgacggcgaggacatcgagacgctgatgcagaacgccgacgccgcgatgtaccag
gcgaagggcgccgggcgcaacctcgtcaagttcttcgcgcccgacatcgccgagcgcacc
cgctaccggctgacgctcgaagcctgcctgcgcagcgcgatcgccatgcacgagttccgg
ctcgaataccagccgtgcgtcgatgcgcatacgggtgaactggtcgccgtggaaggtttg
ctgcgctggaacagcccgcagatcggcatcgtctcgcccgcgcagttcattccggtcgcg
gaagatacgcgcctcatcattccgatcggcgcgtgggtgataaacgaagcctgccagcag
atcgccgcgtgggacgccgaaggtctgacgccgctgcgtgtttcgatcaacctgtcggcg
atccagttgcgcgatccggacctgatcggcacgctcgcggacagtctcgcgcggcatggc
gtcgcgccgtggcggctcgaactcgagatcaccgaaaccgtgctgatggacaacgcggag
aactatctcaccatgatcaacgcgatccgcgcgctcggggtcaagctctcgctcgacgat
ttcggcatcggctactcgagcctcagctatctgaaccgttttcccctcgaccggctcaag
atcgatcgggcgttcgtgctcgacatgctcgatgcccgcgcggacctcgccatcgtccgc
gcgatcatcgaactggggcacgagctgggcttgcgggtggtcgccgagggcgtcgaaagc
gagcatcaggcgcgcatcctgcgcacgatcggttgcgacgaactgcagggctttctgttc
tccaaagcgttgtcgccggccgatttatggtcgtggacgaacgcgcgcaaggtggcctga
DBGET
integrated database retrieval system
