Paraburkholderia xenovorans LB400: Bxe_B1075
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Entry
Bxe_B1075 CDS
T00340
Name
(GenBank) Sigma54 specific transcriptional regulator with GAF sensor, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bxe
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bxe03000
]
Bxe_B1075
Transcription factors [BR:
bxe03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bxe_B1075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
HTH_IclR
HTH_29
HTH_23
HTH_30
HTH_7
HTH_22
Phage-MuB_C
HTH_17
Mg_chelatase
MCM
HTH_28
HTH_Tnp_ISL3
IstB_IS21
AAA
nSTAND6
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABE34880
UniProt:
Q13M09
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All DBs
Position
2:2183088..2185151
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AA seq
687 aa
AA seq
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MLRRGIERRATYPPCPFHRRHALTQRSANPPAVGRPDVIAQAHARSLELGLRASEMPDFH
PLRRPALRELVDRNQSLYTHALPVMETLHAQIVDTQSMVLLTDNHGVILHSLGDSDFVEK
ANRVALCPGVSWAEADRGTNAIGTALVDGQPTVVHAGEHFLHANRILTCSCAPIADPFGR
TIGALDVSGDTRGFHKHTLALVRMSAQMIENHLFSNQFVDAIRVHFHARAEFIGTLFEGL
AAFAPDGTFLSANRSALFQFGQPLAELQRQPFDALFGIAFSRVLQQITRAPGETILLTLP
SGVRVVARGEHTAPRYVGPAESLDTSRAPLPGGARQTPRPAEPAPLATLETLDTGDAQVA
AILRRVAKLRGRDIPILVLGKTGTGKEWLARAIHHDSPRRAAPFVALNCASLPDTLIEAE
LFGYEDGAFTGAKKRGSVGKIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERTVVPLGAT
RAIPVDLRIVCATHRNLRAMIEDGTFREDLYYRINGLVVTLPALRERTDLHALVTRMLAL
QPDGERLPRRVSAEVLERFAQCRWPGNLRQLANVLRTASIMAEGAQQIELDDLPDDFLQD
CVDAAAEQSVQSPLARAGSGVDDEARAAAQTQGQGQQPPSGKMEAWQASLIAQTLERLDG
NVSAAARELGLARNTVYRYLRRGGTTH
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccgcggcatcgagcggagggcaacgtacccgccgtgtccgtttcaccggaga
catgccttgacccaacgttctgccaacccgcccgccgtcggtcggcccgatgtcatcgcg
caggctcacgcccgctcgctcgagctcggtctgcgcgcgtcggaaatgccggactttcat
ccgctgcgccggcccgcgctgcgtgagctcgtcgatcgcaatcagtcgctttatacgcac
gcgcttccggtcatggaaacgctgcatgcgcagatcgtcgatacgcaaagcatggtgctg
ctcaccgacaatcacggcgtgatcctgcacagtctcggcgacagcgacttcgtcgaaaaa
gccaatcgcgtcgcgctgtgtccgggcgtttcgtgggccgaggcggatcgcggcaccaac
gcgatcggcaccgcgctcgtggacgggcagccgaccgtcgtgcacgcgggtgaacacttc
ctgcacgccaaccgtattctcacctgctcgtgcgcgccgattgcggatccgttcgggcgc
accatcggcgcgctcgacgtgagcggcgatacgcgcggctttcacaagcacacgctcgcg
ctcgtcagaatgtcagcgcagatgatcgaaaatcatctgttctccaatcaattcgtcgat
gcgattcgcgttcactttcacgcgcgcgcggagttcatcggcacgctgttcgaagggctc
gcggcattcgcgccggacggcacgtttctgtcggccaaccgcagcgcgctgtttcaattc
gggcagccgctggccgaactgcaacggcaacccttcgatgcactgttcgggatcgccttc
tccagggtgttgcagcagatcacgcgcgcgcccggcgaaaccattctgctgacgctgcca
agcggcgtgcgcgtggtggcgcgcggcgaacacaccgcgccccgatatgtcggaccggcc
gaaagcctcgacacctcgcgcgcaccgctcccgggcggggcgcgtcaaacgccgcgcccc
gccgagcctgcgccgctcgccacgcttgaaacgctcgacaccggcgacgcgcaggtcgcc
gcgatcctgcggcgtgtcgccaaactgcgcggccgcgatattccgattctcgtgctcggc
aagacgggcaccggcaaggagtggctcgcgcgcgccatccatcacgattcgccgcgacgg
gccgcgcctttcgtcgcgctgaattgcgcgtcgttgcccgatacgctgatcgaagcggag
ttgttcggttacgaagacggcgcgttcaccggcgcgaaaaagcgcggcagcgtcggcaag
atcgtgcaggccgacggcggcacgctgttcctcgacgaaatcggcgacatgccactcgcc
cagcaggtgcgtttgatgcgcgttctgcaggagcgcaccgtcgtgccgctcggcgcaacc
cgggcgattccggtggatctgcgcattgtctgcgcgacccaccgcaacctgcgcgcgatg
atcgaagacggcaccttccgcgaagacctctattaccggatcaatggactcgtggtgacg
ctgcctgcgctgcgcgagcgtaccgatctgcatgcgctcgtcacgcgcatgctggccttg
cagcccgacggcgagcggctgccgcgccgcgtgtcggccgaggtgctcgaacgatttgcg
caatgccgctggccgggcaatctgcggcaactggccaacgtgttgcgcaccgcgagcatc
atggccgaaggtgcgcagcagatcgaactcgacgatctgcccgacgactttctgcaggat
tgcgtcgacgcggcggcggagcaaagcgtgcaatcaccgctggcgcgtgcgggttcaggc
gtggacgacgaggcccgcgccgctgcgcaaacccaggggcaaggtcaacaaccgccgtcc
ggcaagatggaagcgtggcaggcctcgctgattgcgcagacgctcgagcgactcgacggc
aatgtgtcggcggcggcgcgcgagctgggattggcgcgcaatacggtgtaccgctatttg
cgacgcggcggcacgacgcattga
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