Paraburkholderia xenovorans LB400: Bxe_B1162
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Entry
Bxe_B1162 CDS
T00340
Name
(GenBank) putative DNA topoisomerase, type I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bxe
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxe03032
]
Bxe_B1162
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_B1162
Enzymes [BR:
bxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bxe_B1162
DNA replication proteins [BR:
bxe03032
]
Prokaryotic type
DNA Topoisomerases
Bxe_B1162
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bxe_B1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
ABE34794
UniProt:
Q13M95
LinkDB
All DBs
Position
2:2087668..2088930
Genome browser
AA seq
420 aa
AA seq
DB search
MAATTTPTQRRPERTEDDRAKPAAPAVMPPGLRHADDTKPGFTRKRENGEFVYFDVAGKR
IDDEDEIRRINALAIPPAYENVWICPDARGHIQATGRDARGRKQYRYHPRWRETRDADKY
ERMAEFGRALPKIRARVARDLNLPGMQRDKVIAAIVQLLDTTLIRIGSVEYARDNQSYGL
TTLRKKHVKIEAGRLRFRFRGKSGIEHDVTVNNPRIRRIVRRCAELPGHDLFQYLDEDGT
RRTVGSADINDYLRRASGADFTAKDYRTWAGSVYALAALRRLICSSAAEARRHIVATVKD
VAALLRNTPAVCKRCYIHPAVISAFEADELQSLAPGQSRRGLRVDEVAFAALLAHAEKRA
ARLARQAGAKGRKARESAVTESIDTSVTSLLKKSRKVGKAAAAKADIKAGAQTARAAAHV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaacgactccgactcaacgccgccccgaacgtacggaagacgaccgcgcg
aaacccgccgctcctgccgtcatgccgcccggtttgcgccatgccgacgacacgaaaccg
ggcttcacgcgcaagcgtgaaaacggcgaattcgtctatttcgacgtggcgggcaaacgc
atcgacgacgaagacgaaatcaggcgcatcaacgcgctcgccattccgcccgcctatgaa
aatgtatggatctgcccggacgcccgcggccatatccaggcgaccggacgcgacgcgcgc
ggacgcaagcaataccgctatcacccgcgctggcgcgagacacgcgacgccgacaaatac
gagcgcatggccgagttcggccgcgcattgccgaagatccgcgcgcgtgttgcgcgcgat
ctgaatctgccgggcatgcaacgcgacaaggtcatcgccgcgatcgtgcagttgcttgac
acgacgttgatccggatcggcagcgtcgaatacgcgcgcgataatcagtcgtacggattg
actacgctgcgcaagaagcacgtgaagatcgaagcgggccggctgcgtttcaggtttcgc
ggcaagagcggcattgaacacgacgtgacggtgaacaatccgcgcatcaggcgcattgtg
cggcgttgcgccgaactgccgggccacgacctgttccagtatctcgacgaagacggcacg
cgccgcaccgtcggctccgccgacatcaacgactacctgcgccgtgcgagcggcgcggat
ttcaccgccaaggactaccggacgtgggccggcagcgtctatgcgctggccgcgctgcga
cggctgatttgcagcagcgcggcggaagcgcgccgccacatcgtcgcgactgtcaaggac
gtggctgcgctattgcgcaataccccggccgtgtgcaagcgctgctacattcacccagcg
gtgatcagcgcattcgaagcggacgaattgcagagtctggcgccgggccagtcgcgccgt
ggactgcgagtggacgaagtggcgtttgccgcgttgcttgctcacgccgagaagcgcgcg
gcaaggctcgcgcggcaggcaggggcgaaaggccgcaaggcgcgtgagtcggcggtgacg
gaaagcatcgatacgtcggtcacgagcttgctgaaaaaatcgcggaaggtaggtaaggcg
gcggctgcgaaggctgatataaaggccggcgcgcaaaccgcccgcgctgcagcgcatgtc
tag
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