KEGG   Paraburkholderia xenovorans LB400: Bxe_C1051
Entry
Bxe_C1051         CDS       T00340                                 
Name
(GenBank) Sigma-24 (FecI)
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bxe  Paraburkholderia xenovorans LB400
Pathway
bxe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bxe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bxe_C1051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bxe03021]
    Bxe_C1051
Transcription machinery [BR:bxe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Bxe_C1051
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_23 DUF6680 HTH_28 PhyR_sigma-like
Other DBs
NCBI-ProteinID: ABE36918
UniProt: Q13G71
LinkDB
Position
3:complement(1088933..1089469)
AA seq 178 aa
MENRLRRQFKREPALGERAYLLGEEFRRSYDWLKSRLWRKVGCPFVAEDLSSEAFVQLAE
VPDIRAIREPRALLTTISQRLVFDFWRRRDLEQAYLRELAYAPEAVACSEQETHEMVQLL
IEIDRRLSGLPEKVQQAFMYSQLDGMTYAEIASLLDVSVSMVGQYMTKALKHLMNVSP
NT seq 537 nt   +upstreamnt  +downstreamnt
atggaaaatcgtctgcggaggcagttcaagcgcgaaccggcgcttggcgaacgggcttac
ctgctgggtgaggagttcaggagaagctatgactggctcaagagtcgtctatggcgcaag
gtcggatgtccgttcgttgccgaggacctgagttccgaggcgttcgtacaactagccgaa
gttccggacattcgcgccatccgcgagccgcgcgcgttattgacgactatttcgcaacga
ctcgtattcgacttctggcggcgccgggatctcgaacaggcctacctgcgggaactcgcg
tatgcgcctgaagccgtcgcctgttcggagcaggaaacccacgaaatggtgcagttgctg
atcgaaatcgaccggcgtctgtcgggattgccggagaaagtccagcaggcgtttatgtac
agccagctggacggcatgacctacgctgaaatcgcgagcctgctggacgtgtcggtcagc
atggtcggtcaatatatgacgaaggctctcaagcatctgatgaacgtctccccatga

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