Bacillus xiamenensis: BK049_00345
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Entry
BK049_00345 CDS
T04852
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
bxi
Bacillus xiamenensis
Pathway
bxi02020
Two-component system
bxi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bxi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BK049_00345
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BK049_00345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxi03021
]
BK049_00345
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bxi02035
]
BK049_00345
Transcription machinery [BR:
bxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BK049_00345
Bacterial motility proteins [BR:
bxi02035
]
Flagellar system
Flagellar assembly proteins
Stator
BK049_00345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0175
TerL_ATPase
DUF7096
CT_C_D
HNF-1_N
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
AOZ87258
UniProt:
A0AAC9IEU0
LinkDB
All DBs
Position
complement(80860..81627)
Genome browser
AA seq
255 aa
AA seq
DB search
MQSLNYEDQALWARWKEWKDPAAGDDLMRRYMPLVTYHVGRISIGLPKSVHKEDLISLGM
LGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVTPTEVAEELGMSEQDVVTTMNEGFFANLLSIDEKLHDQEDGENVQVMIRDEKSV
TPEEKMLKDELIEQLAEKMTELSEKEKLVISLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKHLLDKAIQS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttaaattacgaagatcaggcgctatgggctagatggaaagagtggaaggac
ccagctgctggagatgatcttatgcgccgctatatgccgctcgtcacatatcatgttgga
agaatttccatcggtctcccgaagtcagtgcataaagaagacttgatcagtctagggatg
ctcggtttatatgatgcccttgaaaaatttgacccaggaagagatctgaagtttgatact
tatgcatccttcagaatccgcggggccatcattgacggtcttcgtaaagaggactggctg
cctcgtacatcaagagaaaaaacaaaaaaagtagaagcggctattgaaaagcttgaacag
cgttatttgcgaaatgtgacgccaacagaagttgctgaggagctcggcatgagtgaacaa
gatgttgtcacaacgatgaatgaagggttctttgcgaatttgctctcaattgacgagaag
ctgcatgatcaagaagacggagaaaacgtccaagtcatgattcgcgacgaaaagtcagtg
acacctgaagagaaaatgctgaaagatgaattaattgaacagcttgctgaaaaaatgaca
gagctttcggaaaaagaaaagcttgtgattagtcttttctataaagaggaattgacgtta
acggaaatcggtcaagtgctcaacttatctacctcccgcatttcgcaaatccattcaaag
gcattgttcaagcttaagcacctgcttgataaagccattcaatcttaa
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integrated database retrieval system