Bacillus xiamenensis: BK049_03240
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Entry
BK049_03240 CDS
T04852
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bxi
Bacillus xiamenensis
Brite
KEGG Orthology (KO) [BR:
bxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bxi03019
]
BK049_03240
Messenger RNA biogenesis [BR:
bxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BK049_03240
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AOZ87809
UniProt:
A0AAC9IG79
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All DBs
Position
complement(647312..648259)
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AA seq
315 aa
AA seq
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MAKGIMTYDVGEQVDLHLLIKSSTKGIASNGKPFLTLILQDQSGDIEAKLWDAKQNDELT
YAAQTIVKVVGDIHHYRGRNQLKLRNIRPVAENEQIRIDDFLETAPIPKHDMMDTIMQYI
FDMKNPNIQRVTRHLLKKYGQEFADYPAATKNHHEFVSGLAYHVVSMLHLAKSIVDLYPS
LDRDLLYSGIILHDLGKVKELSGPVSTTYTVEGNLIGHISIMVTEIAKAAEELGIDSEEI
LILQHLVLSHHGKGEWGSPKPPMVKEAEILHYIDNLDAKMNMMDRALEHVKPGEYTERIF
ALENRSFYKPTFHNE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagggatcatgacctatgacgtcggcgaacaagttgacctgcatttattaatt
aaatcatctactaaagggattgcaagtaatggcaaaccatttttaaccttaattcttcaa
gatcaaagtggagatattgaggcgaagctatgggatgcaaagcagaatgatgagcttaca
tatgccgcgcaaaccatcgtgaaggtagtaggtgatattcatcattatcgcgggaggaat
caactgaagcttaggaatatacgccctgttgctgaaaacgagcaaattcgaattgatgat
tttctagaaacagctcctattccaaaacacgatatgatggataccattatgcaatatatt
tttgatatgaaaaatcctaatattcaacgtgtcacaagacatttgctcaagaagtatgga
caggaattcgccgattatccagcagctacaaaaaaccatcacgagtttgtatcgggtctt
gcctatcatgtggtatctatgctgcatttagcgaaatcaattgttgatctatatccatca
ctcgatcgagatcttttatattcaggcatcattcttcatgatttagggaaagtcaaagag
ctttccggtccagtttcgactacttatacagtcgaagggaatttaattgggcatatttct
attatggtgacagaaattgcaaaagccgcagaagagcttggtattgattcagaggaaatt
ctcattttacaacacttagtgctaagtcatcacggaaaaggagagtggggcagtcctaaa
ccgccaatggtgaaggaagctgaaattctccactatattgataatttagacgcgaaaatg
aacatgatggatcgtgcgcttgaacatgtgaagccaggagaatatacagagcgtattttt
gcattagagaatcgttcattttataaaccaacctttcacaatgaataa
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