Bacillus xiamenensis: BK049_07540
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Entry
BK049_07540 CDS
T04852
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bxi
Bacillus xiamenensis
Pathway
bxi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bxi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BK049_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxi03021
]
BK049_07540
03400 DNA repair and recombination proteins [BR:
bxi03400
]
BK049_07540
Enzymes [BR:
bxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BK049_07540
Transcription machinery [BR:
bxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BK049_07540
DNA repair and recombination proteins [BR:
bxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BK049_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AOZ88565
UniProt:
A0AAC9IFD6
LinkDB
All DBs
Position
complement(1499436..1503035)
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGNTPLEKKQLLSEKEFRAYLDKYGNTFQAAMGAEAINKLLQ
DIDLVKEVDTLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGAIGEGMVFKDTDEALLAYQNGYVHLHTRVAVA
ASSLKNVTFTDEQRSKLLITTVGKLIFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGE
DVKAAIEKQEINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQQILEEAQAKVDNVMKQFRRGLITEEERYERVISIWSSSKDVIQGKLMKSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKSIKEGNEIIEKLE
ERLIGRFARKPIVHPETGEVIVGENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGVVAEINDVRDKQQEIVVQGEVETRSYTAPYNARLKVVEGDKVTR
GQVLTEGSIDPKELLKVTDMTAVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
ADAGDTDVLPGTLLDVHQFTEANKKVLFEGKRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMPNYRKVKPVSQVQPSDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtctcgcatcacctgataaaatc
cgttcttggtcttttggtgaagtgaaaaagcctgaaacgattaactatcgtacactgaaa
cctgaaaaagatggtctcttttgtgaacgtatcttcggaccgcaaaaagactgggaatgt
cattgtggaaagtataaacgcgttcgttataagggtgttgtatgtgaccgttgtggtgta
gaagtaacacgggcaaaagtccgtcgtgagagaatggggcatattgaactggctgcccca
gtttcccacatttggtatttcaaaggtatcccaagccgtatgggtcttgttcttgatatg
tcaccacgtgcgttagaagaagtgatttacttcgcttcttacgtcgtgacagatccgggc
aacactccgcttgagaagaaacaacttctttctgagaaagaattccgtgcttatttagat
aaatacggtaatacgttccaagcagctatgggcgcagaagcgattaacaaacttcttcaa
gacattgatcttgtgaaagaagtagatacactcaaagaagagctgaaaacagctcaagga
cagcgtcgtacacgtgcgatcaaacgccttgaagtgttggaagccttccgtaactcagga
aataagccatcttggatgatccttgatgtacttccggtgattccaccagaattacgtcca
atggttcagcttgatggtggacgttttgctacttctgacctgaacgacctttatcgtcgt
gtcattaaccgtaacaatcgtctgaagcgtttattagatcttggcgcgccaagcatcatc
gtacagaacgagaagcgtatgcttcaagaagctgtcgatgccttgattgataatggacgt
agaggccgaccagtaacaggaccaggaaatagaccattgaaatctctttctcacatgctg
aaagggaaacaaggacgtttccgtcaaaacttgcttggtaaacgtgttgactattctgga
cgttccgttatcgtcgtaggaccacatttgaaaatgtatcagtgtggacttccgaaagaa
atggctcttgaattatttaaaccattcgtgatgaaggagcttgttgaaaaaggattagct
cacaacattaagagtgcgaagcgtaagattgagcgcgtgcagccggaagtttgggatgtt
ttagaatcagtgattcgtgagcatccagtcttactaaaccgcgcaccaactcttcacaga
cttggtattcaagcgtttgaacctacacttgtggaaggccgcgcaattcgtctgcatcca
cttgtatgtacagcctacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagctcaagctgaagctcgtatcttaatgcttgctgctcaaaacattttg
aacccgaaagatggaaaacctgttgttacgccatctcaggatatggtgcttggtaactac
tacctcacacttgagcgtaaaggtgctatcggagaaggtatggtcttcaaagatactgac
gaagcccttctagcctatcaaaatggatatgtacatcttcatacacgtgtagctgttgca
gctagctcgttgaagaatgtcacattcactgatgaacagcgttctaaattgttgattaca
acagttggaaaactgatctttaacgaaattttaccggaatcattcccatacatgaatgag
ccgactaagagcaatattgaagaaaaaacgcctgatcgtttcttccttgaaaaaggtgag
gatgtcaaagctgcgatcgagaagcaagaaatcaatgcgccgttcaaaaaaggtatttta
ggaaaaatcattgcggaaatctttaagagatttcatatcactgagacatctaaaatgctt
gaccgcatgaaaaatctcggtttcaaatattctactaaagccggtattacggttggtgta
tctgatatcgtcgtattagatgataaacagcaaatccttgaagaagcacaagcgaaagta
gataacgtcatgaagcaattcagacgtggtttgattacagaagaagagcgttatgagaga
gtaatttcaatctggagttcttctaaagatgtcatccaaggtaaactgatgaagtccctt
gatgaagtcaacccgatctacatgatgagtgactctggagcgcgtggtaacgcatctaac
ttcactcagctggctggtatgcgtggtctgatggccaacccggctggacgtatcattgaa
cttccgattaaatctagtttccgtgaaggtttaaccgtattggaatactttatttccact
cacggagcgcgtaaaggtcttgccgatacagcccttaaaacagctgactcaggttacctc
acgcgtcgtctcgttgacgttgcacaggatgtcattatccgtgaaacagattgcggtaca
gaccgcggaatcttggcgaagtccattaaagaaggaaatgaaattattgagaaacttgaa
gaacgtctcatcggacgttttgcaagaaaaccaattgttcatcctgaaacgggcgaagtc
attgttggcgaaaacgaactaattgatgaagataaagcacttgaaatagtcgaagcaggt
atcgaggaagtatggattcgttctgcatttacatgtaacacgcctcatggtgtatgtaaa
cgatgctacggccgtaaccttgcaactggtactgacgttgaagttggtgaagcagttgga
atcatcgctgcacaatcaatcggtgaacctggaacacagcttacaatgcgtacgttccat
actggtggggtagcaggagacgatatcacacaaggtttacctcgtatccaagagctattt
gaagcgcgtaatccgaaagggcaggcaaccatctctgaaattgatggtgtcgttgctgaa
attaacgatgttcgtgacaagcagcaggaaattgtggttcaaggcgaagttgaaactcgt
tcttacacagctccttacaatgcacgtctgaaagttgttgaaggtgacaaagtcactcgt
ggtcaagtactgacagaaggctcaatcgatccgaaagaacttcttaaagtgactgacatg
acagctgttcaagaatatctgcttcatgaagtacaaaaggtataccgtatgcaaggggta
gaaattggagataagcacgtagaggtaatggttcgccaaatgcttcgtaaagtgcgtgtc
gctgatgcaggggatacagacgtattgccaggcacacttcttgatgtacaccaattcact
gaagcgaacaaaaaggtactatttgaaggcaaacgtcctgcaacaggccgtccagttctt
cttggtattacaaaagcatcgcttgaaacagactcattcttgtctgcggcatccttccaa
gaaacgactcgtgtcctaacagatgcggcgattaaaggaaaacgtgatgaactgcttggc
ttgaaagagaatgttatcatcggtaaacttgttcctgctggaacgggaatgccaaactac
cgtaaagttaagccggtttcgcaagtgcaaccgtctgacgacatggttcctgtagagtaa
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integrated database retrieval system
