Bacillus xiamenensis: BK049_17665
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Entry
BK049_17665 CDS
T04852
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bxi
Bacillus xiamenensis
Pathway
bxi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK049_17665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bxi03019
]
BK049_17665
03400 DNA repair and recombination proteins [BR:
bxi03400
]
BK049_17665
Enzymes [BR:
bxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BK049_17665
Messenger RNA biogenesis [BR:
bxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BK049_17665
DNA repair and recombination proteins [BR:
bxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BK049_17665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
AOZ90383
UniProt:
A0AAC9NE46
LinkDB
All DBs
Position
3437444..3439234
Genome browser
AA seq
596 aa
AA seq
DB search
MLRQAEALLKQYYGFDAFRQGQKQAIESIVSKGKDTVCIMPTGGGKSVCYQIPALMMEGT
TIVVSPLISLMKDQVDALNEMGIRSSFLNSTLSAGELNARLKKCENGEYDLLYITPERLQ
NERFFQLLHQLTIPLIAIDEAHCISEWGHDFRPSYRFIQECLNKLPKRPVIVALTATATK
KVHQDICQQLGMNGEETIFTGFARENLSFQVVKGQNSDHFITQYMKKNSLESGIIYTATR
KEADQIYNRLKKQKIKVGIYHGGLDDDVREDQQNLFLNDDIQVMVATSAFGMGINKSNVR
FVIHHQIPRDIESYYQEAGRAGRDGLESECILLFSPQGVRVQRFLIEQSTEDEVRYQHEL
FKLRQMVDYCHTEQCLQQFVMDYFDQSASAPCQKCSNCLDEREREDVTREAQMVLSCTVR
MNERFGKMMIAQVLAGSKNKKVLDLGFDRLPTYALMKHHSAQHISDFIEFLITEEYLHMS
EGTYPTLKVTYKGKKVLVGQEAVYKKQAIKAMAIQENDALFEQLRVVRMRLAREQGVPPF
VVFSDQTLKEMSAVEPKTEEELLNIKGVGAQKREKYGDAFLEEIRLFIEKEKKSSV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacaagcagaagcactccttaaacaatattatggctttgatgcctttaggcag
ggacagaaacaagccattgaatcgattgtaagcaaaggaaaagataccgtctgcattatg
ccgacaggcggagggaaatcggtttgctaccagattcctgccctgatgatggaaggcaca
acgatcgttgtatctccgcttatttctttaatgaaagatcaggtggatgcgttaaatgag
atgggaatacgatcgtcttttttaaacagtacactttcagcaggcgaattgaatgcaagg
ctgaaaaaatgtgaaaatggtgaatatgatctgctgtatatcacccctgaacgcttacaa
aatgaacgcttttttcagctgcttcatcaattgacgattcctttaatcgctattgatgaa
gcgcactgtatatctgagtggggtcatgattttagaccgagctatcgctttattcaagaa
tgtttaaataagctgccgaaaaggccggtgattgtggcattaacagcaacagccacaaaa
aaagttcatcaggatatatgtcagcagcttggcatgaacggggaagaaaccatctttact
ggttttgctagagaaaatttatcctttcaagtggtgaaaggacaaaacagcgaccatttc
atcacacaatatatgaagaaaaacagtcttgaatcaggcattatttatacagctacacga
aaagaagcagatcagatttacaatcgcttaaaaaagcaaaagatcaaagtgggtatttac
catggaggattagatgatgatgtgcgagaggatcagcaaaacctctttttaaatgatgac
attcaggtgatggtggctacgtctgcatttggcatgggaatcaataagtccaatgtacgt
tttgtcattcatcatcaaattcctagggatattgaaagctactatcaagaagcaggacgg
gccggcagagacgggcttgaaagtgaatgcattttgctcttttcacctcaaggcgtacga
gtgcagcgttttctcattgagcaatcgacagaagatgaagtgcggtatcagcatgaattg
tttaaactaagacaaatggtcgattactgtcatacggagcagtgccttcagcaatttgtg
atggactattttgatcaatcagcaagtgcgccttgtcaaaagtgcagcaattgcttagac
gagagagagcgtgaagacgtcacaagagaagcgcaaatggttttatcttgcaccgttaga
atgaacgaacgattcggaaaaatgatgattgcccaagtattagcgggctcaaaaaacaaa
aaagtgcttgatcttggtttcgaccgtcttcctacatatgctttaatgaagcatcattca
gcccagcacattagtgatttcattgaatttttaattacagaagagtatttacatatgtca
gaaggaacgtatccaacgctaaaggtgacgtataaaggaaagaaagtgctagtagggcaa
gaggctgtttataaaaagcaggcgatcaaagctatggccattcaagaaaacgacgcacta
tttgagcagttgagggtagtgagaatgaggttagcaagagagcagggcgttccgccgttt
gttgtattttctgatcaaacattgaaggaaatgtcagcagtagagcctaaaacggaagaa
gaacttctgaatattaagggtgtcggcgctcaaaaaagagagaaatacggggatgctttt
ttagaagaaatacgtttatttatagaaaaagagaaaaaatcaagcgtttga
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