Bradyrhizobium xenonodulans: I3J27_00380
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Entry
I3J27_00380 CDS
T09324
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bxn
Bradyrhizobium xenonodulans
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_00380 (addB)
Enzymes [BR:
bxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I3J27_00380 (addB)
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I3J27_00380 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WBL78922
LinkDB
All DBs
Position
88021..91167
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPLSVPFLRTIVSALLDGRLVDGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMAADAVVLPRIVALGDIDEDELAFADEGEQFSGATPLDVPPRLGELERRLTLAQLVAAW
AKGPVLSPLVVGGPASTLALAGDLARLIDDMVTRGVDWSALDGLVPDQLDRYWQHSLEFL
RIARIAWPGHLAEINRIEPAARRDLLIAAEARRLTAHRHGPVIAAGSTGSMPATAKFLHA
VAQLAHGAVVLPGLDTDLDDDAWRSIGGVRDSLGKFAEHPASNHPQYALHALLDRFGIKR
SDVEILQPPADGGRDLLASESMRPSAKTEVWHDRLKQPDVAAKVAGGMTNLAVVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVIAALTRWNLAFDDSGGDVLIETSAGVF
ARLTAEAATKGLEPPTLLAMLKHPLCRLGGAPGARKAAIESLELAVLRGTRPPAGTAGLL
REFNRFREELAKLWRSEVSALHKAEPRARLKAEDLDRIQALIDTLRQALAPIESLASSKP
FDFAELAHRHREIIIELSRDEQGIPLAFEEREGLALASAFDDLLRGGTTSGLMVTLPDYA
ELFQTAFSDRAVRRRDKPGARLQIYGPLESRLMQADRIIVGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGDEVILTHSAKAGGAPAVASRFLHRLEAVAGDD
PWKTAIRAGEKYVQFAGALDQPAEVSPIKQPEPRPPRATRPLRMSVTEIEDWLRDPYTIY
AKRILKLDALDPVDMPLSAADRGSAIHDALGEFTERYATRLPDDPSRVLRAIGEKHFALL
MERPEARALWWPRFQRIARWFGEWETVRRGAIESITAETRGEISITLDSTRSFKLSARAD
RIERRQGGGYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGSSVSQLVY
VRLSGNNPPGEERILELKYKQGDEPQPPDTAAAEARAKLEALIRAFEDENQPYTSLNLPM
WTNRYGTYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccctctcagttccgttcctgcgcacgattgtctcggcgctg
ctcgatggacggctggtcgacggcttcgaggcgcgcaaggagccggcgcggcttgcggat
gccaccctgtacctgccaacccggcgcgccatgcgcgtcgtccgcgagatttttctcgac
gagatggcggcggacgcggtggtgctgccgcgcatcgtcgcgctcggtgatatcgacgag
gacgagctcgctttcgccgacgagggcgagcagttttcgggcgcgacgccgctcgacgtt
ccgccgcggctcggcgagctcgaacggcggctgacgctggcgcagctcgtcgccgcctgg
gccaagggcccggtgctgtcgccgctggtggtcggcgggcccgcctcgacgctggcgctg
gccggcgacctcgcccgcctgatcgacgacatggtgacgcgcggcgtcgactggagcgcg
ctcgatggcctcgtgcccgaccagctcgatcgctactggcagcactcgctcgaattcctg
cgcatcgcgcgcattgcgtggcccggtcatctcgccgagatcaaccggatcgagcctgcg
gcgcggcgcgatctcctgatcgcagccgaagcaaggcggctgaccgcgcatcgccatggc
cccgtgatcgcggccggctcgaccggctcgatgccggccaccgcaaaattcctgcatgcg
gttgcacagctagcgcacggcgcggtggtgctgccggggctcgacaccgatctcgacgac
gatgcatggcgcagcatcggcggcgtacgcgattcgctcggcaagttcgcggagcatccg
gcgtcgaaccatccgcaatatgccctgcacgcgctgctggatcgtttcggcatcaagcgc
agcgacgtcgaaatcctgcaaccgcccgcagacggcggccgcgatctgctcgcatccgaa
tcgatgcggccatccgccaagacggaagtctggcacgaccggctgaagcagcccgatgtg
gccgccaaggtcgccggcggcatgacaaatctcgcagtcgtcgaagcccccaaccctgag
atggaagccctcgccatcgccatcgcgatgcgcgaggcgcggcatctcgacaaatcggcc
gcgctggtgacgccggatcgcgcgctggcgcggcgggtgatcgccgcgctgacgcgatgg
aatctcgccttcgacgattccggcggcgacgtgctgatcgaaacgtccgccggcgtcttt
gcgcggctcaccgcggaggcggcgaccaagggattggagccgccgacgctgctggcgatg
ctgaaacatccgctgtgccggctcggcggcgcgccgggcgcgcggaaggcggcgatcgag
agcctcgagcttgcggtcttgcgcggcacgcgcccgccggccggcaccgcgggcctcttg
cgtgaattcaatcgctttcgcgaggagctggcgaagctgtggcgcagcgaggtctccgcg
ctgcacaaggccgagccgcgcgcgcgtctcaaggccgaggatctcgaccgcatccaggcg
ctgatcgacaccttgcgacaagccttggcgccgatcgagagcctcgcatcgtcaaagcca
ttcgacttcgcggagctcgcgcaccggcaccgcgagatcataatcgagctgtcgcgcgac
gagcaaggcattccgctcgccttcgaggagcgcgagggcctcgcgctcgccagcgccttc
gacgatctcctgcgcggcggcacgaccagcggactgatggtgacgctgcccgactacgcc
gaactgttccagaccgcgttcagcgaccgcgccgtgcgccggcgggacaagcccggcgcg
cgcctgcagatctacggcccgctggaatcgcgcctgatgcaggccgaccgcatcatcgtc
ggcggcctgatcgagggcgtctggccgccggcgccgcggatcgatccctggctgagccgg
ccgatgcgccacgagcttgggctcgatctgccggaacgccgcatcggcctctccgcgcac
gacttcgcgcaactgctcggcggcgacgaggtgattctcacccattccgccaaggccggc
ggcgcaccggcggtggcctcgcgcttcctgcaccggcttgaagcggttgcaggcgatgat
ccctggaagacagccatccgcgcgggcgaaaaatacgtgcagttcgcgggcgcgctggac
cagcccgccgaggtcagtccgatcaagcagcccgagccgcgcccgccgcgcgcgacgcgg
ccgctcaggatgtcggtcaccgagatcgaggactggctgcgcgatccctacacgatctac
gccaaacgcatcctcaagctcgacgcgctcgatcccgtcgatatgccgctgtcggccgcc
gaccgcggctcggcgatccacgatgcgctcggcgagttcaccgaacgttatgccacgcgt
cttccggacgatccctcacgtgtgctgcgcgcgatcggcgagaagcattttgcacttttg
atggagcggcccgaggcgcgggcgctgtggtggccgcgcttccagcgcatcgcgcgctgg
ttcggcgaatgggaaacggtgcggcgcggtgcgatcgaatcgatcaccgcggagacgcgc
ggcgagatctcgatcacgctcgacagcacgcgcagcttcaagctgtccgcgcgcgccgac
cgcatcgagcggcgccagggcggcggctacgccattctcgactacaagaccgggcagccg
ccgaccggcaagcaggtccgcatgggcctgtcgccgcagctcacgctggaagccgcgatc
ctgcgcgagggcggttttcccgacatcgatgccggatcgtccgtgagccagctcgtctat
gtccgcctgagcggcaacaatccgcccggcgaggagcggatcctcgagctcaagtacaag
cagggcgacgagccacagccgccggacaccgcggccgcggaggcgcgcgccaagctggag
gcgctgatccgcgcctttgaggacgagaaccagccctacacctcgctgaacctgccgatg
tggaccaaccgctacggcacctatgacgatctcgcccggatcaaggaatggtctgcggcc
ggcggattggggatcgaggaatggtga
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integrated database retrieval system
