Bradyrhizobium xenonodulans: I3J27_01315
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Entry
I3J27_01315 CDS
T09324
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bxn
Bradyrhizobium xenonodulans
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxn03032
]
I3J27_01315
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_01315
Enzymes [BR:
bxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I3J27_01315
DNA replication proteins [BR:
bxn03032
]
Prokaryotic type
DNA Topoisomerases
I3J27_01315
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I3J27_01315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
WBL79091
LinkDB
All DBs
Position
279162..280331
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTMRPASADPAAVALAKALGQWPKPASSTRPSPKKVFDSASPAAVEDLAKELG
LRLGDQNELTIRRIRRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSSH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDCFVLTFKAKGGKAVRKEC
DAAKLVRAIGILNGVPGKRMFQYRDANGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatgcggcccgcttcagccgatcctgcagccgtt
gcactggccaaagccctcggacagtggccgaaaccggccagttccacccgtcccagcccg
aaaaaggtctttgattcagcttccccggccgcggtcgaggacctggccaaggagcttggc
ctgcggctcggcgaccagaacgagctgaccatccgccgcatccggcgcggcaagggctat
tcattcgtccgccccaacggcgcccatatccgcgacgcccgcaccatccgccgcctgcac
gccatggcggtgccgccggcctatcgcgaggtccgctactcggctgatccgagctcgcat
ctccaggcggtgggacgcgatgccgcgggccggctgcaatatcgctatcacgccgactgg
gagaaggtccgcgagcaccgcaaggcgcatcgcctggagaagctcgtcggcgcgctgccg
aagattcggcgcaaggtctcggcgttcctgtcaggcgacgagccgacgcgtgaattcgcg
ctctcggccgtgatcgagctgatcgcgcgcaccgcgatccgtcccggcaatgaatcctac
gcgcgcctcaacggcacccgcggcgcgaccacactgctgaagtcgaacgtgacgctggaa
gacgattgcttcgtgctgaccttcaaggcgaagggcggcaaggcggtgcgcaaggaatgc
gacgcagccaagctggtgcgtgccatcggcattttgaacggcgttcccggcaagcgcatg
ttccagtatcgcgatgccaacggcatcgtgcgtgcggtcagcaccacacaggtcaacgcc
ttcctgcgcgagatcgccggcatcaagatatcgctgaaggattttcgcacgctgatggcc
tctgccgtcgtcgtggaatcgctgtcgcggatcacgcccgcgaccagccagcgcggccgc
aagaagcaggtgctggacgcgatccgcgccgccgccgacaagctctccaacacgccggcg
atctgccgcaagagctacgtccacgacaccatcgtcaccgccttcgaggacggcatcctc
gagcgcttcgccgcgaccatgaagggccagcgttcgcaggctaggcgcgagcagctcttg
cagcaggtggtggcgaccgcagcggtttga
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