Bradyrhizobium xenonodulans: I3J27_05790
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Entry
I3J27_05790 CDS
T09324
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I3J27_05790 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_05790 (uvrB)
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I3J27_05790 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I3J27_05790 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_16
Microtub_bd
SWI2_SNF2
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
WBL79941
UniProt:
A0ABY7MNH7
LinkDB
All DBs
Position
complement(1225882..1228782)
Genome browser
AA seq
966 aa
AA seq
DB search
MAKKPAPPKSPKTKTPNSKAHRPDVQPIGPALAELLNPAINRGDAGLGSGTGLQPPPDNS
RDRRAGGEAAAHRARASTPRDFPSDRPAGLDEAPQANYGTAATIPTLDPELARQLGLPTE
EDDAEALARPPRNKMEALGVKATAEALESLIREGRPEFRKDDGSTKVWTPHRPPRPEKSE
GGVRFEIKSSYEPRGDQPTAIKELVEGIDRNDRSQVLLGVTGSGKTYTMAKVIEATQRPA
LILAPNKTLAAQLYGEFRNFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQID
RMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMTFALKKGERIDQRQLIADLVALQ
YKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFGDSIETIEEFDPLTGHKQDELEF
IKMYANSHYVTPRPTLVQAIKSIKSELKQRLDQLHDQGRLLEAQRLEQRTTFDLEMMEAT
GSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALIFADESHVTIPQIGAMFRGDFRRKAT
LAEYGFRLPSCMDNRPLRFEEWDMMRPQTVAVSATPSGWELNESGGVFVEQVIRPTGLID
PPVDIRPARTQVDDLVGEVRATALAGYRSLITVLTKRMAEDLTEYLHEQGIRVRYMHSDI
DTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIG
RAARNVDGKVILYADQMTGSMERAIAETNRRREKQVEYNTANGITPESVKKQIGDILNSV
YERDHVLVEVGGHDMTDDVISIGHNFEAVLADLETRMREAAADLNFEEAARLRDEVKRLR
ATELAVVDDPTVKQRTVAGKAGAYAGTKKYGDAANLPVSAMKNKSAATALKAGSGKGSRV
HKPHLDEMHGPESLPYRENRPLPSKPFGGESRIIQPTDSRQSGPEFGPAPKSTGGMPGRR
GGWKKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacctgctcccccaaaatcccccaaaaccaagacgccgaactcgaaggcc
catcggcctgacgtgcagccgatcgggcccgcgctggccgaattgctgaatcctgcgatc
aatcgcggcgatgccgggctgggttcgggcactgggctgcagccgccgccggacaattcg
cgcgaccgccgcgccgggggcgaggccgccgcgcatcgcgcgcgcgcttcgacgccgagg
gattttcccagcgaccgcccggccggcctcgacgaagcgccgcaggccaattacggcacc
gcggccacgatcccgacgctcgatccggaactggcgcgacagctcggccttcccaccgag
gaggacgatgcggaggcgctggcgcgtccgccgcgcaacaagatggaggcgctcggcgtc
aaggccaccgccgaagcgctggaatcgctgatccgcgagggccgtccggagttccgcaag
gacgacggctctacgaaagtgtggacaccgcatcgccctccccgcccggaaaagtccgaa
ggcggcgtgcgcttcgagatcaaatcgtcctacgagccgcgcggcgaccagccgaccgcg
atcaaggagttggtcgagggcatcgatcgcaacgaccgctcgcaggtgctgctcggcgtc
accggctccggcaagacctacaccatggccaaggtgatcgaggcgacgcagcgccctgcg
ctgatcctggcgccgaacaagacgctcgccgcccagctctatggcgagttcaggaatttt
ttcccggacaacgcggtcgagtattttgtcagctattacgactactaccagccggaagcc
tatgtcccccgcacggatacctacatcgaaaaggattcgtcgatcaacgagcagatcgac
cgcatgcgccattcggcgacgcgcgcgctgctcgaacgcgacgacgtcatcatcgtcgcg
tcggtgtcctgcatctacggtatcggctcggtcgagacctacaccgcgatgacgttcgcg
ctgaagaagggcgagcgcatcgaccagcgccagctcatcgccgacctcgtcgcgctccag
tacaagcgcacccaggccgatttcacccgcggcaccttccgggtgcgcggcgacgtcatc
gacatcttcccggcgcactatgaggaccgcgcctggcgcgtgaacctgttcggcgacagc
atcgagaccatcgaggaattcgatccgctcaccggccataagcaggacgagctcgaattc
atcaagatgtacgccaactcgcactatgtgacgccgcgtccgacgctggtgcaggcgatc
aagtcgatcaagtcggaattgaagcagcggctcgaccagctccacgaccagggacgcctg
ctcgaagcgcagcggctggagcagcgcaccaccttcgacctcgagatgatggaggcgacg
ggaagctgcgcgggcatcgagaactattcgcgctatctcaccgggcgccgccccggcgag
ccgccgccgacgctgttcgaatacgtgcccgacaacgcgctgatcttcgccgacgagagc
cacgtcaccatcccgcagatcggcgccatgttccgcggcgacttccgccgcaaggcgacg
ctggccgaatacggcttccgcctgccctcctgcatggacaaccgcccgctccgcttcgag
gagtgggacatgatgcggccgcagaccgtcgcggtgtcggcgacgccgagcggctgggag
ctcaacgagagcggcggcgtgttcgtcgagcaggtgatccgccccacgggcttgatcgat
ccgcccgtcgacatccgccccgcccgcacgcaagtggacgatctcgtcggcgaggtccgc
gccaccgcgctggccggctatcgttcgctgatcacggtgctgaccaagcgcatggcggag
gatctcaccgaatacctgcacgagcagggcattcgcgtccgctacatgcacagcgacatc
gacaccatcgagcgcatcgagatcatcagggatctgcgcctcggcgcgttcgacgcgctg
gtcggcatcaacctgttgcgcgaaggcctcgacattcccgaatgcgcgctggtcgccatt
ctcgatgccgacaaggaaggttttctgcgcagcgagacctcgctgatccagaccatcggc
cgcgccgcgcgcaatgtcgacggcaaggtgatcctctatgccgaccagatgaccggctcg
atggagcgcgccatcgccgagaccaaccgccgccgcgagaagcaggtcgagtacaacacc
gccaacggcatcacgccggagagcgtgaagaagcagatcggcgacatcctcaactcggtc
tacgagcgcgaccacgtgcttgtcgaggtcggcggccacgacatgaccgacgacgtcatc
tcgatcggccacaacttcgaagccgtgctcgccgatctcgaaacaaggatgcgcgaggcc
gccgccgacctgaacttcgaggaagccgcccgcctgcgcgacgaagtcaagcgcctgcgc
gcgaccgaactcgcggtcgtcgacgaccccaccgtcaagcagcgcactgttgcgggcaag
gcgggcgcctatgccggcaccaagaagtacggcgacgccgcgaacctgccggtcagcgcg
atgaagaacaagagcgccgcaaccgcgctcaaggccggcagcggcaagggctcacgcgtg
cacaagccgcatctcgacgagatgcacggcccggaatcgctgccctaccgcgaaaaccgc
ccactgccgtcaaagccgttcggcggcgagagccggatcatccagccgacggactcgcgg
cagtcggggccggagttcgggcccgcaccgaagtcgacgggcgggatgccggggcgaagg
ggcgggtggaagaagaggtag
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