Bradyrhizobium xenonodulans: I3J27_11950
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Entry
I3J27_11950 CDS
T09324
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I3J27_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_11950
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I3J27_11950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WBL81089
UniProt:
A0ABY7MSD0
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Position
complement(2564947..2565933)
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AA seq
328 aa
AA seq
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MAPRANWKGFLRLSLVTCPVALYPATSDTEKVSFNQINRKTGHRIKYLKVDAETGDEVTS
EDIVKGYKVDTDTYIEVTKDELDDIALDSTHTIDIDEFVPKTDIDNRYLIRPYYLVPDGK
VGHDAYAVIRETIRSMDKVAIGRVVLTNREHIIALEPLESGLMGTLLRYPYEVRGEKEYF
DEIQDVKLTKDMLDLAKHIVEKKSGAFEPELFEDHYETALIDLINKKRSGAPIAAKATPK
TGGNVINLMDALKKSIANEKDAPAAKVVKETVKGKKPKKRVEGQREMLLPISGKGGKDAA
AAKAAPKDAAKKAADKPARAPARAKKAG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccccccgcgccaattggaagggttttctgcgtctgtcgctcgtgacctgtccggtc
gcgctgtatccggccacttcggataccgagaaggtttcgttcaaccagatcaaccgcaag
accggccaccggatcaagtacctcaaggtcgacgccgagaccggtgacgaggtgacgtcc
gaggacatcgtcaagggctacaaggtcgacaccgacacgtacatcgaagtcaccaaggac
gagctcgacgacatcgcgctcgattccacgcacacgatcgacatcgacgagttcgtgccg
aagaccgacatcgacaaccgctatctgatccgcccctattacctcgtgcccgacggcaag
gtcggccacgacgcctatgcggtgatccgcgagaccatccgcagcatggacaaagtcgcg
atcggccgcgtggtgctgaccaaccgcgagcacatcatcgcgctggagccgctcgagagc
ggcctgatgggcacgctgctgcgctacccctacgaggtgcgcggcgagaaggagtatttc
gacgagatccaggacgtgaagctgacaaaggacatgctcgatctcgccaagcacatcgtc
gagaagaaatccggcgcgttcgagcccgaattgttcgaggatcattacgagaccgcgctg
atcgacctcatcaacaagaagcgatcgggcgcgccgatcgcggcaaaggccacgccgaag
accggcggcaacgtcatcaatctgatggacgcgctgaagaagagcatcgcgaacgagaag
gatgcgcccgcggcgaaggtcgtcaaggagaccgtcaagggcaagaagccgaagaagcgc
gtcgagggccagcgcgagatgctgctgccgatctcaggcaagggcggcaaggacgctgct
gctgcgaaggctgcgcccaaggacgcggcgaagaaggccgccgacaagccggcacgcgca
ccggcgcgggccaagaaggccggatag
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