KEGG   Bradyrhizobium xenonodulans: I3J27_14345
Entry
I3J27_14345       CDS       T09324                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bxn  Bradyrhizobium xenonodulans
Pathway
bxn00010  Glycolysis / Gluconeogenesis
bxn00020  Citrate cycle (TCA cycle)
bxn00260  Glycine, serine and threonine metabolism
bxn00280  Valine, leucine and isoleucine degradation
bxn00310  Lysine degradation
bxn00380  Tryptophan metabolism
bxn00620  Pyruvate metabolism
bxn00630  Glyoxylate and dicarboxylate metabolism
bxn00640  Propanoate metabolism
bxn00670  One carbon pool by folate
bxn00785  Lipoic acid metabolism
bxn01100  Metabolic pathways
bxn01110  Biosynthesis of secondary metabolites
bxn01120  Microbial metabolism in diverse environments
bxn01200  Carbon metabolism
bxn01210  2-Oxocarboxylic acid metabolism
bxn01240  Biosynthesis of cofactors
Module
bxn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bxn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bxn_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bxn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bxn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bxn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    I3J27_14345 (lpdA)
   00020 Citrate cycle (TCA cycle)
    I3J27_14345 (lpdA)
   00620 Pyruvate metabolism
    I3J27_14345 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    I3J27_14345 (lpdA)
   00640 Propanoate metabolism
    I3J27_14345 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    I3J27_14345 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    I3J27_14345 (lpdA)
   00310 Lysine degradation
    I3J27_14345 (lpdA)
   00380 Tryptophan metabolism
    I3J27_14345 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    I3J27_14345 (lpdA)
   00670 One carbon pool by folate
    I3J27_14345 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bxn04147]
    I3J27_14345 (lpdA)
Enzymes [BR:bxn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     I3J27_14345 (lpdA)
Exosome [BR:bxn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   I3J27_14345 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like GIDA NAD_binding_8 FAD_binding_2 FAD_binding_3 FAD_oxidored AlaDh_PNT_C UDPG_MGDP_dh_N Lys_Orn_oxgnase 3HCDH_N NAD_binding_7 Lycopene_cycl
Other DBs
NCBI-ProteinID: WBL81538
LinkDB
Position
complement(3124836..3126230)
AA seq 464 aa
MNELSCKLLIIGAGPGGYTCAIRAGQLGIDTIVVEAEKPGGTCLNVGCIPSKALIHAAGE
YEAIARAAVGRNALGISTATPLLDFAKTVAWKDNIVRRLNSGVAGLLKRAGARHVTGRAS
FRDGKTIEVETQSGRQVIHAEMVVIATGSEPIALPLLPFGGRVISSTEALALTEIPAKLV
VVGGGYIGLELGTAFAKMGAAVTVVEAAPRILPQYDGDLSEPVARRLTTLGITVLTGAKA
TALVADGSALALASSDEQTSLEADKILVTVGRRPVMSGFGLETLDLDRNGPFIRIDDRCR
TSMRGVFAIGDITGEPMLAHRAMAQGEMVAEIVAGLRRAWDRVSIPAICFTDPEIVTVGL
SPSEASEKGFDVKTDLFPFKANGRALTLERDDGFIRTVARADNHLLLGIQGVGAGIAELS
ATFSLALEMGARLEDVAMTIHAHPTQSEAFHETALKSLGHAIHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgaacgaactttcctgcaagcttctcatcattggtgctggccctggcggatatacctgc
gcgatccgcgccggccagctcggcatcgatacgatcgtcgtcgaggccgaaaagccaggt
ggcacctgtctcaacgtcggctgcatcccttcgaaggccctgatccacgccgctggggag
tatgaagcgattgcacgtgccgcggtggggaggaatgctcttggcatttccactgcaacg
ccattgctcgactttgccaagaccgtcgcctggaaggacaatatcgtccgacgtctgaac
agcggcgtggctggcctgctgaaaagagccggcgccaggcatgtcaccggccgcgcctca
tttcgcgacggcaagaccatcgaggtcgaaacgcaatccggccgacaggtgatccatgcc
gagatggtggtgatcgcgacgggttccgagccgatcgcgctgccgcttcttcccttcggg
ggtcgcgtgatctcgtcgaccgaggctttggcgctcaccgaaattccggcgaaacttgtc
gtcgtcggcggcggctacattggcctcgagctcggtacggcgtttgcgaaaatgggcgcg
gccgtcacggtcgtcgaggccgcgccacgcattctcccgcaatacgatggcgacctgagc
gagcccgtcgcaagacgcctgaccaccctcggaatcacggttctgacaggcgcaaaggca
acggcgctcgtcgcggacggctcggcgctggccttggcctccagtgatgagcagacatca
ctcgaagccgacaagatccttgtaacagtcggccgcaggcccgtgatgtcaggcttcggc
cttgagaccctcgatctcgacaggaatggacctttcatccgtatcgatgaccgatgccgt
acgtcaatgcgcggcgtcttcgcgatcggtgacatcacgggagaaccgatgctggcgcat
cgcgccatggcacaaggcgagatggttgcagagatcgtcgccggtctccgccgcgcctgg
gaccgggtttcgatcccggcgatctgcttcactgatccggagatcgtcacggttggcctg
tcaccgagcgaggcgagcgagaagggcttcgacgtcaagaccgacctctttccattcaag
gccaacggtcgtgcgctgacgctggagcgggacgacggcttcatccggaccgtggcacgg
gccgacaatcatctcctgcttggcatccagggtgtcggagccggcatcgctgaactttca
gcaaccttcagccttgcgctggagatgggtgcacgcctcgaggacgtcgcgatgaccatc
cacgcgcatccaacccaaagcgaggcctttcacgagaccgcgctgaagtcgctgggacac
gcgattcatatctga

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