Bradyrhizobium xenonodulans: I3J27_19500
Help
Entry
I3J27_19500 CDS
T09324
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bxn
Bradyrhizobium xenonodulans
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bxn03009
]
I3J27_19500 (rimO)
Enzymes [BR:
bxn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I3J27_19500 (rimO)
Ribosome biogenesis [BR:
bxn03009
]
Prokaryotic type
ribosomal protein modification factors
I3J27_19500 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WBL75240
UniProt:
A0ABY7MAL3
LinkDB
All DBs
Position
4151725..4153050
Genome browser
AA seq
441 aa
AA seq
DB search
MDQTAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHVDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLV
GAGVKELLVISQDTSAYGVDLKYAESPWKDRQVRAKFLDLARELGELGAWVRLQYVYPYP
HVDEVIALMNEGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRS
TFIVGFPGETDADFAYLLDWLDEAEIDRLGCFKYEPVAGATSNAIENPVPEEVKQERYNA
LMARQQKISARRLKRKVGTRQQIIIDEVGPTVLKGRSKADAPEIDGAVYLSSRRPLRVGE
IVTAKIERADQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacggctgcgcccaaggtcagcttcgtgtcgctcgggtgtcccaaggcattg
gtggattccgagcgcatcatcacgcgcctgcgcgccgagggctacgagctcgcccgcaag
catgacggggccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtgaccggt
tgcatgggcgccgagcccgagcagatcgagcaggcctatcccggcgtgctctccatcacc
ggaccgcagcaatatgagagcgtgctggacgccgtgcatcgcgcgctgccgcccgcgcac
aatccgcatgtcgacctggttccgccgcagggcatcaagctgacgccgcgccactacgcc
tatttgaagatctccgaaggctgcaacaaccgctgcaccttctgcatcatcccgaagctg
cgcggcgatctcgtctcgcgcccggccaatgacgtgctgcgcgaggccgagcggctggtc
ggcgccggcgtcaaggagctgctggtgatctcgcaggacacctcggcctatggcgtcgac
ctcaaatatgccgagagcccgtggaaggatcgccaggtccgcgccaaattcctcgacctc
gcgcgcgagctcggcgagctcggcgcctgggtccggctgcaatatgtgtacccctacccg
catgtcgacgaggtcatcgcgctgatgaacgagggcaaggtgctgccctatctcgacatc
ccgttccagcatgcaagccccgaggtgctgaaggcgatgaagcgcccggcggcgcaggac
aagacgctggcgcgcatcaagcgctggcgcgaggaatgtccggatctcgcgctgcgctcg
accttcatcgtcggcttccccggcgagaccgacgcggatttcgcttatctgctcgactgg
ctcgacgaggccgagatcgatcggctcggctgcttcaaatacgagccggttgcgggcgcg
acgtcgaatgcgatagagaacccggtgccggaagaggtcaagcaggagcgctacaacgcg
ctgatggcccgccagcagaagatctctgcacgcaggctcaagcgcaaggtcggcacgcgc
cagcagatcatcatcgacgaagtcggcccgacggttttaaaaggccgctccaaggccgat
gcgccggagatcgacggcgcggtgtatctctccagccgccgtccgttgcgcgtcggcgaa
atcgtcaccgcgaagatcgagcgcgcggaccaatacgatctgcacggcagcgtcgcgggg
ttctga
DBGET
integrated database retrieval system
