Bradyrhizobium xenonodulans: I3J27_20650
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Entry
I3J27_20650 CDS
T09324
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03030
DNA replication
bxn03430
Mismatch repair
bxn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I3J27_20650 (dnaE)
03430 Mismatch repair
I3J27_20650 (dnaE)
03440 Homologous recombination
I3J27_20650 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxn03032
]
I3J27_20650 (dnaE)
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_20650 (dnaE)
Enzymes [BR:
bxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I3J27_20650 (dnaE)
DNA replication proteins [BR:
bxn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I3J27_20650 (dnaE)
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I3J27_20650 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WBL75456
LinkDB
All DBs
Position
complement(4394331..4397834)
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNMFGALEFSDKMAGS
GIQPIVGCELAIDFGDQDPNARSALPPSRVVLLAAQERGYRSLMRLNSRAFLETPDTHAS
HIKFDWLEGETEGLIVLTGGPDGPISLALAAGQAEIAALRCERLASLFGDRLYVELQRHG
IDKERRIESGLIDMAYAKGLPLVATNEPYFATTDDYEAHDALLCIAGGRLVAETDRVQLT
PDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPMTRKPILPFFTVGAAASSDAASVE
AAELKRQAEEGLANRLRVHGLSQGTTEEDYNKRLAFELDVIMRMKYAGYFLIVSDFIKWA
KGQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIKYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKPRNIDIDLATLPIDDT
ASYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCARKH
GDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGATFEVGDNTIYYALAALKGVG
IQAIEQIIEERTKRGLFTSLADFAARVNPRAINKRIIESLAAAGAFDTLESNRARVFAGA
DAILASCQRAHQAETIGQNDMFGGSADAPSIMLPQIEPWLPAERLRREYDAIGFFLSGHP
LDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLRI
FVRDTKPLDSIAKRLAGPDMATSNGAALKVGSPAIAPRSNGDGEVSLVMMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaagctcgccgagctcgccaagaaggaccaccagcccgcgctggcc
ttgaccgacaccgacaacatgttcggtgcgctggagttctccgacaagatggcgggctcc
ggcatccagccgatcgtcggctgtgagctggcgatcgatttcggcgaccaggatccgaat
gcgcgcagcgcgctgccgccgtcgcgcgtggtgctgctggcggcgcaggagcgcggctat
cgcagcctgatgcggctgaactcgcgcgcgttcctggaaacccccgacacccatgcctcc
catatcaagttcgactggctcgaaggcgagaccgaaggcctgatcgtgctcaccggcggc
cccgacggcccgatctcgctggcgctggccgcaggccaggccgagattgcggccttgcgc
tgcgaacgtctggccagcctgttcggcgaccgtctctatgtcgaattgcagcgccacggc
atcgacaaggaacggcgcatcgagagcgggctgatcgacatggcctacgccaagggcctg
ccgctggtcgcgaccaacgagccgtatttcgccacgaccgacgactacgaggcgcatgac
gcgctgctctgcatcgccggcggccggctggtcgccgagaccgatcgcgtgcagctcacg
cccgatcaccgcttcaagacccgcgccgagatggcagtgctgttcgccgacattccggag
gcgctggcctcgacggtggagatcgccgagcgctgctcgttccgcccgatgacgcgcaag
ccgatcctgccgttcttcaccgtgggtgccgcagccagttctgatgccgcgtcggtcgag
gcggccgagttgaagcggcaggcggaggaggggctcgccaaccgcctgcgcgtgcacggg
ctgtcgcagggcaccacggaagaggactacaacaagcgtctggcgttcgagctcgacgtc
atcatgcgcatgaagtacgcgggctacttcctgatcgtgtccgacttcatcaaatgggcc
aaaggtcagggcattccggtcgggccgggccgcggctccggcgcaggctcgctggtcgcg
tgggcactgaccatcaccgacctcgatccgatcaagttcggcctgctgttcgagcgcttc
ctcaatccggaacgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgc
ggcgaggtgatcaagtacgtccaggagcgctacggtcgcgaccaggtcgcgcagatcatc
accttcggtacgctgcaggcccgcggcgtgctgcgcgacgtcggccgcgttctgcagatg
ccctacggccaggtcgacaagctcaccaagctcgtgccgcagaatccggccgcgccggtg
acgctggcggcggcgatcgagagcgagccgaagcttcaggccttccgcgatgaagacccg
gtcgtggcgcgcgcgttcgacatcgcccagcgccttgagggcctgacgcgccacgcctcg
acgcacgcagccggcatcgtgatcggcgatcgccccttgagcgagctcgtgccgatgtac
cgcgatcccaaatccgatatgccggtaacccagttcaacatgaaatgggtcgagccggcg
ggcctcgtgaagttcgacttcctcggcctgaagacgctgaccgtgctcgacgtcgccgtg
aaactgctcaagccgcgcaacatcgacatcgacctggcgacgctccccatcgacgatacc
gcgagctaccagatgctggcgcgcggcgaggtggtcggcgtgttccaggttgaaagccag
ggcatgcgccgcgcgctggtcgacatgcgccccgaccgtttcgaggacatcatcgcgctg
gtggcgctgtatcgccccggtccgatggcgaacatcccgacttattgcgcgcgcaagcac
ggcgacgaggagccggaatatctgcatccggtgctggagccgatcctgaaggagacgttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggctattcg
ctcggcgacgccgacttgctgcgccgcgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgcgggcgcggtcaagaacggcgtgccgaaggggcaggcc
gaaaccatcttcgaactgctggcgaagttcgccgactacggcttcaacaagagccatgcg
gcggcctacgcgctggtgtcctaccataccgcctacatgaaggcgcattatccggtggag
ttcatcgcggcgtcgatgacgctcgatctgaacaacaccgacaagctctccgaattccgc
tccgaggcgcagcgactcggcatcaaggtcgagccgccgaacatcaaccgttcgggggcg
accttcgaggtcggcgacaacacgatctactacgcgctcgcagcgctcaagggcgtcggc
atccaggcgatcgagcagatcatcgaggagcgcaccaagcggggcctgttcacctcgctt
gccgacttcgccgcacgggtcaatccgcgcgcgatcaacaagcgcatcatcgaaagtctc
gccgccgccggcgccttcgacacgctggaatccaaccgcgcccgcgtcttcgccggcgcg
gatgcgatcctcgcctcctgccagcgcgcgcatcaggccgagaccatcggccagaacgac
atgttcggcggctcggcggacgcgcccagcatcatgctgccgcagatcgagccgtggctg
ccggccgagcggctgcgccgcgaatatgacgcgatcggcttcttcctgtcgggccatccg
ctcgacgattacgccaccgtgctgaagcgcctgcgggtgcagagctgggcggaattctcc
cgcgcggtgaagaccggggcgaccgccggcaaggtcgcagcgaccgtggtctcgcgcatg
gagcggcgcaccaagactggcaacaagatgggcatcatgggactttccgatcccacgggc
cacttcgaggcggtactgttctccgagggccttgcgcaatatcgcgacgtgctcgagccg
ggcgccgcggtgctgctccagttaggcgcggaattgcagggcgaggacgtccgcgcccgc
gtgctgcatgccgagccgctcgatgacgccgccgccaagacgcagaagggcctgcgcatc
ttcgtgcgcgataccaagccgctggactcgatcgccaagcggctggccggccccgacatg
gcgacgtcgaacggcgccgcgctcaaagtcggcagtcccgccatcgcgccgcgctcgaac
ggcgacggcgaggtctcgctggtgatgatgctcgacctcgagaccgaggtcgagatgaag
ctgcccggccggttcaaggtctcgccgcagatcgccggcgccatcaaggcggtggcgggc
gtggtggacgtgcagcagatctaa
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