KEGG   Bradyrhizobium xenonodulans: I3J27_20845
Entry
I3J27_20845       CDS       T09324                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bxn  Bradyrhizobium xenonodulans
Pathway
bxn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bxn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I3J27_20845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bxn03019]
    I3J27_20845
Messenger RNA biogenesis [BR:bxn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     I3J27_20845
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B RNase_J_C Lactamase_B_2 PSMdelta
Other DBs
NCBI-ProteinID: WBL75491
UniProt: A0ABY7MD82
LinkDB
Position
complement(4437182..4438852)
AA seq 556 aa
MAKPDELVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
SFLEKERKNLMGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSAALFEAKCAAERNAPKI
PVTVVPSGGRVDIGPFNVEFIPVAHSIPESHALAIHTDVGTVLHTGDWKIDPTPIIGRPT
DEKRLRELGDAGLIALIGDSTNAVRDGRSPSEAEVAKTIVELVKAAKGRVAVTTFASNVA
RLKAVAAAARAADREVVVVGRAMERVVQVARETGYLDGVQNFRSPEVYGHLPQDKVLALC
TGSQGEPRAALARIANDDHPEITLNRGDSVIFSSRTIPGNEKAVGSIINNLVLQGVEIIT
DRDHLVHVSGHPRRDELRDMIAWTRPQLLIPVHGEALHLHEHAKLARAAGVPRVLVVRNG
DLVKLGPGDPGIVGEVPSGRLYKDGNILEDSKSRAVVERRRMAFSGCAFVAIAMTAQGEL
ADDPEVDLVGIPEKNRAGEPFDDIVFDAVVSTVEGLPKARRRDPDALAESVRRAVRAVIN
EHWGKKPPCLVHVLTV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgaagcccgacgaactggtgtttgcgccactcggcggtgtcggcgagatcggcatg
aacctgtcgatctacggtctcggcaaccgccagcagcggtcctggctggcggtcgatctc
ggcgtctccttcggcgatgaggagcatctgccgggcatcgacctgatcatgcccgacatc
agcttcctggagaaggaacgcaagaacctgatgggcctggtgctgacccacgcccatgag
gaccatttcggtgccatcatcgacctctggccgaaactgaaatgcccgatctacgcgacc
cagttcagcgccgcgctgttcgaggccaagtgcgccgccgaacgcaacgccccgaagatt
ccggtgaccgtggtgccttcgggcgggcgcgtcgatatcggcccgttcaacgtcgagttc
atccccgtcgcgcattcgataccggagtcgcacgctctggcgatccacaccgacgtcggg
accgtgctgcacaccggcgattggaagatcgacccgacaccgatcatcggtcgtcccact
gacgaaaagcggctgcgcgaattgggcgatgcgggcctgatcgccctgatcggcgattcc
accaacgcggtgcgtgacggccgctcgccctcggaagccgaggtcgccaaaaccattgtc
gagctggtcaaggccgccaaggggcgggtcgcagtgacgacctttgcctccaacgtcgcg
cgcctcaaggccgtcgcggccgcggccagggccgccgatcgcgaggtcgtcgtggtcggc
cgcgccatggagcgcgtcgtgcaggtcgcgcgcgagaccggctatctcgacggcgtgcag
aatttccgctcgcccgaggtctatggccatctgccgcaggacaaggtgctggcgctttgt
accggcagccagggcgagccgcgcgccgcgctggcgcgcatcgccaatgacgaccatccc
gagatcaccctcaaccgcggcgacagcgtcatcttctcctcgcgcaccatcccgggcaac
gagaaggcggtcggctcgattatcaacaatctggtgcttcaaggcgtcgagatcatcacc
gaccgcgaccatctggtccacgtctccggccatccccgccgcgacgagctgcgcgacatg
atcgcctggacccggccgcagctcctgatccccgttcatggcgaggccctgcacctgcat
gagcacgccaagctcgcgcgcgccgccggcgtgccccgcgtgctggtcgtccgcaatggc
gacctggtcaagctcggccccggcgatcccggcatcgtcggcgaggtgccgtcgggccgt
ctctacaaggacggcaacatcctggaggattccaagtcccgcgccgtggtcgagcggcgc
cgcatggccttctccggctgcgccttcgtcgccatcgccatgaccgcgcagggcgagctc
gccgacgatcccgaggtcgatctggtcggcattcccgagaagaaccgggccggcgagccc
ttcgacgacatcgtgttcgatgccgtggtctccaccgtcgaaggcctgccgaaggcgcgc
cgcagggatcccgacgctttggccgagtcggtgcgacgcgccgtccgggccgtcatcaac
gaacattggggcaaaaagcccccctgtctggtacacgtcctgacagtttag

DBGET integrated database retrieval system