Bradyrhizobium xenonodulans: I3J27_22085
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Entry
I3J27_22085 CDS
T09324
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bxn
Bradyrhizobium xenonodulans
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxn03032
]
I3J27_22085 (topA)
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_22085 (topA)
Enzymes [BR:
bxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I3J27_22085 (topA)
DNA replication proteins [BR:
bxn03032
]
Prokaryotic type
DNA Topoisomerases
I3J27_22085 (topA)
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I3J27_22085 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Milton
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WBL75723
LinkDB
All DBs
Position
4672381..4675122
Genome browser
AA seq
913 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAS
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGSGAEAEDFKKALELA
TYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPDSMSRKLDADQARLYELIWKRTIASQMESAELERTTVDIVAKAGGRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTASLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDDIKDLRVAQVLDVLDDMLGQHIYPPRTDGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADSEQTADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
QPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPSLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDTVTLAQAIALIDERAAKGGGKKP
KKAAKPAKAKKTAEKAADGEDAAPKKKPAAKKAAKTKSESTSKARAAVSSSAKTSPTKPS
GAKAPAKKSAGTN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctacgaggttctggcctcgttcggccatgtccgcgacctgccggcgaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaggtcgaccccaaggcggccagc
cggctcaacgatatcgccaagtcgctgaagggcgccgaccgcctgattctggcgaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtgatgaaggagaagcgc
gcgctgaaggatcagaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtc
acggacgcgatgaagcatccgcgccagatcgatggtgcgctggtcgacgcctatatggcg
cgccgcgcgctcgactatctggtcggcttcaccctctcccccgtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagctggagatcgagaagttcgttgcgcgcgaatactggtcgctgatcgcgaccctgctg
acgccacgcggtgacgccttcgaggcgcgtctggtcggcgccgacggcaagaagatccag
cgcctcgacatcggcagcggcgcggaagccgaggacttcaagaaggcgctggagcttgcg
acctacgcggtcaccgcggtcgacgcaaagcccgcccggcgcaatccgcaggcgcccttc
accacctcgacgctgcagcaggaagccagccgcaaatacggctttgcccccgcgcacacc
atgcggatcgcccagcgcctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcggaccgacggcgtgcagatcgcccccgaggcgatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctacgtgccggacgccccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaagcgatccgcccgaccgacctctcccgc
cgccccgacagcatgagccgcaagctcgatgccgaccaggcccgactctatgagctgatc
tggaagcgcaccattgccagccagatggaatcggccgagctggagcgcaccaccgtcgac
atcgtggcgaaggccggcggccgcacgctggagctgcgcgcgaccggccaggtcgtcaag
ttcgacggcttcctcgcactttatcaggaaggccgcgacgacgaggaggacgaggactcc
cgccgcctgcccgcgatgagcccgaacgacgccttgaagcggcagtcgctcgccgtcacc
cagcacttcaccgagccgccgccgcgcttctcggaggcttcgctggtcaagcgcatggaa
gagctcggcatcggccgtccctcgacctatgcctcgatcctccaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcgcctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctcgaaagcttctttgcccgctacgtcgaatacgatttcaccgcgagcctcgaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggttctgaaggacttc
tggaccggctttatcggcgccgtcgacgacatcaaggatctgcgcgtcgcgcaagtcctc
gacgtgctcgacgacatgctgggccagcacatctatccgccgcgcaccgatggcggcgac
atcaggcagtgcccgagctgcggcaacggccggctgaacctgaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggagtgccgctacacccgtcagctcgccgccgac
agcgagcagacagccgaccgttcgctcggtcaggatcccgacactggtcgcgatgtctgg
gtcaaggccggccgcttcggcccctacatccagctcggcgagcaaaaggattatgaggaa
ggcgagaagccgaagcgcgcaggcattccgaagggcacctcgcccggcgatgtcgagctt
gagcttgcgctgaagttgctgtcgctgccgcgcgaaattggcaagcatccggaaaccggc
cagccgatcacggccggcctcggccgcttcgggccgttcgtgaagcacgagaagacctat
gccagcctggaggccggcgacgaggtcttcgacatcggcctcaatcgcgcggtcacgctg
atcgcggaaaaggtcgccaagggtccgagccgccgttttggtgccgatcccggcaaggcg
atcggcgatcatccgagcctcggcaccgtcaccgtgaagagcggccgttacggcgcctat
gtcaccgcgggcggcgtcaacgcgacgatcccggccgagttcgaaaaggacaccgtgacg
ctggcgcaggcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaagaagccg
aagaaggcggcgaagccggccaaggccaagaagactgcggagaaggctgccgacggcgag
gacgccgcccccaagaagaaaccggccgcgaagaaggcggccaaaaccaaatccgaatcc
accagcaaggcgcgcgcagccgtgtcgtcgtccgccaagacgtcgccaaccaagccatct
ggcgccaaagctccggccaagaagagcgccggcaccaattag
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