Bradyrhizobium xenonodulans: I3J27_23075
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Entry
I3J27_23075 CDS
T09324
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I3J27_23075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxn03021
]
I3J27_23075
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_23075
Enzymes [BR:
bxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I3J27_23075
Transcription machinery [BR:
bxn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I3J27_23075
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I3J27_23075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
WBL75911
UniProt:
A0ABY7MEB8
LinkDB
All DBs
Position
complement(4864023..4865054)
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVTPGSDSNRFATIVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKSGPGVVTA
GDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPDDSVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactgattcggccgaacaagctc
caggtgacccccggcagcgattcgaaccgctttgcgaccatcgtcgccgagccgcttgag
cgcggcttcggccagacgctcggcaacgcactgcgccgcattctgctctcctcgctccag
ggcgcggcggtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcg
ggcgtccgtgaggacgtcaccgacatcgtgctgaacatcaaggacatctcgatcaagatg
cagggcgaaggccccaagcgcatggtcgtgaagaagtccggcccgggcgtcgtcaccgcc
ggcgacatccagacagtcggcgacgtcgtcgtgctcaacccggacctccagatctgcacg
ctcgacgagggcgccgagatccgcatggagttcacggtcgccaccggcaagggctacgtg
cccgccgagcgcaaccgtcccgaggatgcgccgatcggcctgatcccggtcgacagcctg
tactcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggtgcgatctcgccggatgactcg
gtggcttacgccgcccgcatcctccaggatcagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggccaactgcttgaagaacgacaac
atcgtctacatcggcgacctcgtgcagaagagcgaagcggaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgag
gatcactactga
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