Bradyrhizobium xenonodulans: I3J27_24810
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Entry
I3J27_24810 CDS
T09324
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn00260
Glycine, serine and threonine metabolism
bxn00630
Glyoxylate and dicarboxylate metabolism
bxn00670
One carbon pool by folate
bxn00785
Lipoic acid metabolism
bxn01100
Metabolic pathways
bxn01110
Biosynthesis of secondary metabolites
bxn01200
Carbon metabolism
Module
bxn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I3J27_24810 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I3J27_24810 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
I3J27_24810 (gcvP)
00670 One carbon pool by folate
I3J27_24810 (gcvP)
Enzymes [BR:
bxn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
I3J27_24810 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WBL82672
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All DBs
Position
5198664..5201528
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AA seq
954 aa
AA seq
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MTAHRKSNGDTATFARRHIGPSARDVTAMLETVGAKSVDALMAETLPASIRQAAPLDLGK
PLSETEAITHMAELARQNQVFTSLIGQGYSGTILPAVIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMICDLTGLDVANASLLDEATAAAEAMALAERHSRVEAKAFFVDKDVHP
QTLAVMRTRAEPLGWTLVVGDPLTDLAKDDVLGALLQYPGSSGAVRDLRPAIAALKAKGA
LAIVAADLLALTLLASPGELGADIAIGSAQRFGVPMGYGGPHAAYMAVRDALKRSLPGRI
VGLSVDSRGMPAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYAVYHGPEGLAQIA
RNVHRRAAVLASGLRKLGFAPDSDNFFDTLSVDAGGKRAQIIARAAAETINLGIGDTNLR
IALDETTTPATVEAVWRAFGGTLAYAEIDASTREALPEDLKRKTAFLTHPVFHAHRSETE
MLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMMPLTWPEFGSLHPFAPREQAKGYHA
LFARLEKWLCDITGYDAISLQPNSGAQGEYAGLLAIRGYHAARGETHRKICLIPSSAHGT
NPASAAMVGMDVVVVACEKNGDVDVNDLRAKAEKHSNDLAAVMITYPSTHGVFEEHIREI
CDIVHGHGGQVYLDGANLNAQVGLSRPGDYGADVSHLNLHKTFCIPHGGGGPGMGPIGVK
AHLAPFLPGHPVTNGEAPVGPVSAAPFGSASILTISYIYILMMGGEGLKRATEIAILNAN
YIAARLDAHFPVLYKNAKGRVAHECIVDPRPLKTSSGVTVDDIAKRLIDYGFHAPTMSFP
VPGTLMIEPTESESKAELDRFCDAMIAIRKEIAEVEAGRFKIEASPLRHAPHTVHDIADD
DWARAYPRSEGCFPAGTSRTDKYWSPVGRVDNVYGDRNLVCSCPPVSDYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaccgcaaatccaacggcgacaccgccaccttcgctcgccgccacatcggc
ccctccgcccgcgatgtcaccgccatgctcgaaaccgtcggcgccaagagcgtcgatgcg
ctgatggcggagacgctgccggcctcgatccggcaggccgcgccgctcgatctcggcaag
ccgctgagcgagaccgaggcgatcacgcatatggccgagcttgcacggcagaaccaggtc
ttcacctcgctgatcggccaaggctattccggcacgattttgcccgcggtgatccagcgc
aacatccttgagaatccggcctggtacacggcctacacgccctatcagcccgagatcagc
cagggccggctggaagcgctgctcaacttccagaccatgatctgcgatctcaccgggctc
gacgtcgccaacgcctcgctgctcgatgaagccaccgcggcggccgaagccatggcgctc
gcggagcggcactcgcgggtcgaagcaaaggccttcttcgtcgacaaggacgtgcatccg
cagacgctggctgtgatgcgcacccgcgccgagccgctcggctggaccctggtcgtcggc
gatcccctcaccgatctcgcgaaggatgacgtgctcggcgcgctgctgcaatatccgggc
tcatccggcgcagtgcgcgacctcaggcccgcgatcgcggcgctgaaggccaagggcgcg
ctcgcgatcgtggccgccgatctcttggcactgacattgctcgcctctcccggcgagctc
ggcgccgacatcgcgatcggatcggcgcagcgctttggcgtgccgatgggttatggcgga
ccgcacgcggcctatatggcggtgcgcgatgcgctgaagcgctcgctgcccggccgcatc
gtcggcctctccgtggactcgcgcggaatgcccgcctaccgtctcgcgctgcagacccgc
gagcagcacatccgccgcgagaaggcgacctccaacatctgcaccgcgcaggtgctgctc
gccgtgatcgcctcgatgtacgcggtctatcacggccccgagggcctcgcgcagatcgca
cgcaacgtgcatcgccgcgccgccgtgctcgcgagcggcctgcgcaagctgggctttgcg
cctgacagcgacaacttcttcgacacgctcagcgtcgatgcaggtggcaagcgcgcccag
atcatcgcgcgcgcggctgccgagacaatcaatctcggcatcggtgacacgaacttgcgc
atcgcgctcgacgagaccaccacgcccgcgacggtcgaggcggtctggcgcgccttcggc
ggcacgctcgcctatgccgagatcgacgcttcgacgcgcgaggcgctgccggaggacttg
aagcgcaagaccgctttcctcacccatcccgtcttccacgcgcaccgctcggagaccgag
atgctgcgctacatgcgcaagctctcggatcgcgacctcgcgctcgaccgcgccatgatc
ccgctcggctcctgcacgatgaagctgaacgcgaccaccgagatgatgccgctgacctgg
ccggagtttggtagcctgcatccgttcgctccgcgcgagcaggccaagggctatcacgcg
ctgttcgcgcggctggaaaaatggctgtgcgacatcaccggatatgacgcgatctcgctg
cagccgaattccggcgcgcagggcgagtacgccggcctgctggcgatccgcggctatcat
gccgcgcgcggcgagacgcaccgaaaaatctgcctgatcccctcctccgcccacggcacc
aacccggcctcggccgcgatggtcggcatggacgtggtggtggtcgcctgcgaaaagaac
ggcgacgtcgacgtcaacgatctccgcgccaaggccgagaagcattcgaacgacctcgcc
gcggtcatgatcacctatccctcgacccacggcgtgttcgaggagcacattcgcgagatc
tgcgacatcgtccatggccatggcggccaggtttatctcgacggcgccaacctcaatgcg
caggtcggccttagcaggcccggcgattacggcgccgatgtcagccatctcaatctgcac
aagaccttctgcatcccgcatggcggcggcggccccggcatgggtccgatcggcgtcaag
gcgcatcttgcgccgttcctccccggccacccggtgacgaacggcgaagctcctgtcggc
ccggtctcggccgcgccgttcggctcggcgtcgatcctgaccatctcctacatctacatc
ctgatgatgggcggcgaaggcctgaagcgtgcgaccgagatcgcgatcctcaacgccaac
tacatcgccgcgcgcctcgatgcgcacttcccggtgctctacaagaacgccaagggccgc
gtcgcgcatgagtgcatcgtcgacccgcgtccgctgaagacaagctccggcgtcactgtc
gacgacatcgcaaaacgcctgatcgattacggcttccacgcacccaccatgagcttcccg
gtgccgggcacgctgatgatcgagccgaccgaatcggaatcgaaggcggagctggatcgg
ttctgcgacgccatgatcgcgatccgcaaggagatcgcagaggtcgaggccggccgcttc
aagatcgaggcttcgccgctgcgccacgctccgcacaccgtgcacgacatcgcggatgat
gattgggcccgcgcctacccccgcagcgaaggctgcttccccgcgggcacctcgcgcacc
gacaaatactggagcccggtgggccgcgtcgacaacgtctacggcgaccgcaatttggtg
tgctcctgcccgccggtgagcgattacgcggaagcggcggagtaa
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